RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 C3orf18Q9UK00 162 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 FBXO10Q9UK96 956 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CDC14AQ9UNH5 594 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 HCFC2Q9Y5Z7 792 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 NOTCH4Q99466 2003 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 B4GAT1O43505 415 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 XYLBO75191 536 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF682O95780 498 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 JUNBP17275 347 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 GPX2P18283 190 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CRHBPP24387 322 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 IMPA1P29218 277 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 HOXA9P31269 272 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PIGAP37287 484 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PPP1R8Q12972 351 aaKnown RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 KCNAB2Q13303 367 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 SPIDRQ14159 915 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 GRIN2CQ14957 1233 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 NEDD8Q15843 81 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 VMACQ2NL98 169 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 RFX4Q33E94 735 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 LRRC23Q53EV4 343 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZCCHC8Q6NZY4 707 aaKnown RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 DHRS4L2Q6PKH6 230 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 TMEM220Q6QAJ8 160 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF621Q6ZSS3 439 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZDHHC21Q8IVQ6 265 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ARL10Q8N8L6 244 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CDC26Q8NHZ8 85 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 FOXJ1Q92949 421 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 TBC1D20Q96BZ9 403 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 C11orf24Q96F05 449 aaPredicted RBP8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR4K3Q96R72 315 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ADNPQ9H2P0 1102 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 OCEL1Q9H607 264 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 CDH7Q9ULB5 785 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 PCDHGA8Q9Y5G5 932 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ORC6Q9Y5N6 252 aa8.05□□□□□ -1.12
SND1-IT1-201ENST00000623342 ALPK3Q96L96 1907 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 LOC100130705A0A1B0GUX0 176 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 H3BMQ9 156 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PSMD11O00231 422 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 NPC1O15118 1278 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 KCNK5O95279 499 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CPSF4O95639 269 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 SLC16A8O95907 504 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 HNRNPA1P09651 372 aaKnown RBP eCLIP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CISD3P0C7P0 127 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PRKACGP22612 351 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CTNNB1P35222 781 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 BMPR1AP36894 532 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 POLR2IP36954 125 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ASMTP46597 345 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DGKGP49619 791 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 RAD23AP54725 363 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ST8SIA6P61647 398 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 HPCAP84074 193 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GRSF1Q12849 480 aaKnown RBP eCLIP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DCTN2Q13561 401 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DHCR24Q15392 516 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 SKIV2LQ15477 1246 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 C6orf141Q5SZD1 244 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CPZQ66K79 652 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ANKRD34AQ69YU3 496 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 SHQ1Q6PI26 577 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 EP400NLQ6ZTU2 488 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PARS2Q7L3T8 475 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 R3HCC1LQ7Z5L2 792 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DCP2Q8IU60 420 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZZZ3Q8IYH5 903 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ZNF366Q8N895 744 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CHDHQ8NE62 594 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 OR10Q1Q8NGQ4 319 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 WFIKKN2Q8TEU8 576 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 POF1BQ8WVV4 589 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 COG8Q96MW5 612 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 DUSP26Q9BV47 211 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 EPHX3Q9H6B9 360 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 CIDEBQ9UHD4 219 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 RPS6KA6Q9UK32 745 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 MAPRE3Q9UPY8 281 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 U3KQV3 271 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 H3BM21 787 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 KPNA3O00505 521 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 SCAMP2O15127 329 aaKnown RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 FGBP02675 491 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 C1QCP02747 245 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 LAMP1P11279 417 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 EPCAMP16422 314 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 IL7RP16871 459 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PDHA2P29803 388 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PBLDP30039 288 aaPredicted RBP8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 ARHGDIAP52565 204 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 PNLIPRP1P54315 467 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 GABARAPL2P60520 117 aa8.04□□□□□ -1.12
SND1-IT1-201ENST00000623342 RAE1P78406 368 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms