RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 FPGTO14772 594 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 SEMA3DO95025 777 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 HRH2P25021 359 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 MSX2P35548 267 aaPredicted RBP15.78■□□□□ 0.12
LDB3-208ENST00000623007 NUDT1P36639 197 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 ERFP50548 548 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 CLCNKAP51800 687 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 CYP4F3Q08477 520 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 MED21Q13503 144 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 SLBPQ14493 270 aaKnown RBP eCLIP15.78■□□□□ 0.12
LDB3-208ENST00000623007 PLA2G4EQ3MJ16 856 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 RUNDC3AQ59EK9 446 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 PRPF38BQ5VTL8 546 aaKnown RBP15.78■□□□□ 0.12
LDB3-208ENST00000623007 RNF111Q6ZNA4 994 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 FAM83HQ6ZRV2 1179 aaPredicted RBP15.78■□□□□ 0.12
LDB3-208ENST00000623007 SLC44A3Q8N4M1 653 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 PACRGLQ8N7B6 248 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 PAPD5Q8NDF8 572 aaKnown RBP15.78■□□□□ 0.12
LDB3-208ENST00000623007 TTLQ8NG68 377 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 NSMCE2Q96MF7 247 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 QRFPRQ96P65 431 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 CENPKQ9BS16 269 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 LGR4Q9BXB1 951 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 WASH6PQ9NQA3 447 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 DLGAP4Q9Y2H0 992 aa15.78■□□□□ 0.12
LDB3-208ENST00000623007 MAGEB17A8MXT2 336 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 MAN2B1O00754 1011 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TNFRSF10CO14798 259 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 APBB3O95704 486 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 BMP2P12643 396 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 UQCRBP14927 111 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 FASP25445 335 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 PEX2P28328 305 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TIA1P31483 386 aaKnown RBP eCLIP15.77■□□□□ 0.12
LDB3-208ENST00000623007 DGKQP52824 942 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 YPEL5P62699 121 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 RABL3Q5HYI8 236 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 FAM219BQ5XKK7 198 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TMIGD1Q6UXZ0 262 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 IKBIPQ70UQ0 350 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 ERMP1Q7Z2K6 904 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TBC1D19Q8N5T2 526 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TRPV3Q8NET8 790 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 OR2T12Q8NG77 320 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 EME1Q96AY2 570 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 PPWD1Q96BP3 646 aaKnown RBP15.77■□□□□ 0.12
LDB3-208ENST00000623007 PPM1MQ96MI6 270 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 TSSK3Q96PN8 268 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 MTERF1Q99551 399 aaKnown RBP15.77■□□□□ 0.12
LDB3-208ENST00000623007 THUMPD3Q9BV44 507 aaKnown RBP15.77■□□□□ 0.12
LDB3-208ENST00000623007 UGT2B28Q9BY64 529 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 BTBD1Q9H0C5 482 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 KCNK12Q9HB15 430 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 PRM3Q9NNZ6 103 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 DMRT3Q9NQL9 472 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 GEMIN8Q9NWZ8 242 aaKnown RBP15.77■□□□□ 0.12
LDB3-208ENST00000623007 ANAPC2Q9UJX6 822 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 MMP17Q9ULZ9 603 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 GMEB1Q9Y692 573 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 COLEC10Q9Y6Z7 277 aa15.77■□□□□ 0.12
LDB3-208ENST00000623007 MAGEA13PA6NCF6 341 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 FAM220BPB1ANY3 271 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 RFXANKO14593 260 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 SCELO95171 688 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CCNDBP1O95273 360 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CCR8P51685 355 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ZNF763Q0D2J5 394 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 FGL2Q14314 439 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 PYCR3Q53H96 274 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TBCELQ5QJ74 424 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ERICH5Q6P6B1 374 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 WASH2PQ6VEQ5 465 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CYP2R1Q6VVX0 501 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CHST15Q7LFX5 561 aaPredicted RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ANKFN1Q8N957 763 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TMEM102Q8N9M5 508 aaPredicted RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 ABHD11Q8NFV4 315 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 OR5AR1Q8NGP9 310 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 FAM174AQ8TBP5 190 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 SH3KBP1Q96B97 665 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 RHBGQ9H310 441 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 SLC23A2Q9UGH3 650 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 BTNL2Q9UIR0 455 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 OR1A2Q9Y585 309 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CHD9Q3L8U1 2897 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 TRBV5-3A0A0A0MS03 114 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 GSTA4O15217 222 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 CEACAM5P06731 702 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ANXA6P08133 673 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ANXA4P09525 319 aaPredicted RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 COX7A2P14406 83 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 IL1RNP18510 177 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ATP6V1B2P21281 511 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 HNRNPA2B1P22626 353 aaKnown RBP15.76■□□□□ 0.11
LDB3-208ENST00000623007 IGFALSP35858 605 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 RAB28P51157 221 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 POLE2P56282 527 aa15.76■□□□□ 0.11
LDB3-208ENST00000623007 ABATP80404 500 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms