RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 BEX2Q9BXY8 128 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 PRRG3Q9BZD7 231 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 INTS10Q9NVR2 710 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 AIG1Q9NVV5 245 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 TRPM5Q9NZQ8 1165 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 CCDC59Q9P031 241 aaKnown RBP12.11□□□□□ -0.47
LITAF-221ENST00000622633 ASB1Q9Y576 335 aa12.11□□□□□ -0.47
LITAF-221ENST00000622633 OR1I1O60431 355 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 GMDSO60547 372 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 NIPSNAP2O75323 286 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SLC22A3O75751 556 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 RASAL1O95294 804 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 NPPAP01160 153 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 TNNI3P19429 210 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 RPL35P42766 123 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 FOXM1Q08050 763 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 DSC1Q08554 894 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 ABRQ12979 859 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 ACOX1Q15067 660 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 PTPRRQ15256 657 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 KCNA10Q16322 511 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SPRED1Q7Z699 444 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 P3H2Q8IVL5 708 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 KCT2Q8NC54 265 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SMG7Q92540 1137 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 NEDD4LQ96PU5 975 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 BCL7BQ9BQE9 202 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 APOL5Q9BWW9 433 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 TLR8Q9NR97 1041 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 STOML2Q9UJZ1 356 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 A0A0U1RQS6 177 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 TCRBV5S2A0A599 114 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 CCDC154A6NI56 674 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 E2F3O00716 465 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SNAPINO95295 136 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 IGLV3-27P01718 113 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 GPIP06744 558 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 PRR35P0CG20 571 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 CYBAP13498 195 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 ALOX12P18054 663 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 MSH3P20585 1137 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 F8A1P23610 371 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 CRHBPP24387 322 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 HOXD9P28356 352 aaPredicted RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 HK3P52790 923 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 ADARB1P78563 741 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 RCAN2Q14206 197 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 AANATQ16613 207 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 BCL7AQ4VC05 210 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 PNCKQ6P2M8 343 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 ZNF517Q6ZMY9 492 aaPredicted RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 GLT6D1Q7Z4J2 308 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 PIANPQ8IYJ0 282 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 RIT1Q92963 219 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 CDK15Q96Q40 435 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SEPT5Q99719 369 aaPredicted RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 CRISPLD1Q9H336 500 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 SLC23A1Q9UHI7 598 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
LITAF-221ENST00000622633 PCTPQ9UKL6 214 aa12.1□□□□□ -0.47
LITAF-221ENST00000622633 OR6C70A6NIJ9 312 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 C1RP00736 705 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 APOC1P02654 83 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 C7P10643 843 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SFTPCP11686 197 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 RAB3AP20336 220 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 RFC2P35250 354 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 GNPDA1P46926 289 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 CAPZA2P47755 286 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 GZMKP49863 264 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 POLR2JP52435 117 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 NUBP1P53384 320 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 HUNKP57058 714 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ERVFC1P60507 584 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ERVK-8P63133 956 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 PIGFQ07326 219 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 PCDH1Q08174 1060 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 STARD3Q14849 445 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 AFTPHQ6ULP2 937 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 PRSS48Q7RTY5 328 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 HDDC2Q7Z4H3 204 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 SYTL1Q8IYJ3 562 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 CDYL2Q8N8U2 506 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 MAGEE2Q8TD90 523 aaPredicted RBP12.09□□□□□ -0.47
LITAF-221ENST00000622633 NUDT8Q8WV74 236 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 EEF1AKMT1Q8WVE0 214 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 PDXPQ96GD0 296 aa12.09□□□□□ -0.47
LITAF-221ENST00000622633 RADILQ96JH8 1075 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms