RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 VEZF1Q14119 521 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ARHGAP15Q53QZ3 475 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 AGTRAPQ6RW13 159 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 CROCCP3Q8IVE0 287 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ZDHHC21Q8IVQ6 265 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 NRSN1Q8IZ57 195 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 MAGED4Q96JG8 741 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PANX1Q96RD7 426 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 BTNL2Q9UIR0 455 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 BLOC1S6Q9UL45 172 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 MAPRE3Q9UPY8 281 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 C1orf226A1L170 272 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 KLHL33A6NCF5 533 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 MAGEB17A8MXT2 336 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PSMD11O00231 422 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 CLGNO14967 610 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 KIAA0355O15063 1070 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 SCAMP2O15127 329 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 YY2O15391 372 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 HS6ST1O60243 411 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 EPN2O95208 641 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 C1QCP02747 245 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ABCB1P08183 1280 aaPredicted RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 CCDC159P0C7I6 412 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PTPN2P17706 415 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ENGP17813 658 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 IMPA1P29218 277 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 CTSCP53634 463 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 RAD23AP54725 363 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ERVFC1P60507 584 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ZNF284Q2VY69 593 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PRSS36Q5K4E3 855 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PIWIL3Q7Z3Z3 882 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 SYNPOQ8N3V7 929 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 MYLIPQ8WY64 445 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 WDR34Q96EX3 536 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 NRBF2Q96F24 287 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 TCF25Q9BQ70 676 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 CCM2Q9BSQ5 444 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 TRIT1Q9H3H1 467 aaKnown RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 GPN2Q9H9Y4 310 aaPredicted RBP9.12□□□□□ -0.95
PDPN-212ENST00000621990 SIRT5Q9NXA8 310 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 RPS6KA6Q9UK32 745 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 ABCG2Q9UNQ0 655 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PCDHB11Q9Y5F2 797 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 PCDHGB1Q9Y5G3 927 aa9.12□□□□□ -0.95
PDPN-212ENST00000621990 HIDE1A8MVS5 230 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 E9PQ18 207 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SLC1A7O00341 560 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 E2F6O75461 281 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SLC16A8O95907 504 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CATP04040 527 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 RHOP08100 348 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SRPRAP08240 638 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 INHBBP09529 407 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 COX7A2P14406 83 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 EEF1B2P24534 225 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 HOXA9P31269 272 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 KDELR2P33947 212 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ASMTP46597 345 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 STT3AP46977 705 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PNLIPRP1P54315 467 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SPIDRQ14159 915 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 MEP1AQ16819 746 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SYTL3Q4VX76 610 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 FGD3Q5JSP0 725 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ZNF648Q5T619 568 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 KDM4DQ6B0I6 523 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 OR2T5Q6IEZ7 315 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CAPN13Q6MZZ7 669 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 GALNT18Q6P9A2 607 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LIPIQ6XZB0 460 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CBLL1Q75N03 491 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PIK3C3Q8NEB9 887 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 OR2T29Q8NH02 315 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 RAB2BQ8WUD1 216 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CYB5D2Q8WUJ1 264 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CHTF18Q8WVB6 975 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SORCS1Q8WY21 1168 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 SNX19Q92543 992 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 EZH1Q92800 747 aaPredicted RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 TMEM159Q96B96 161 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 COQ8BQ96D53 544 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 MTERF1Q99551 399 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 PKP4Q99569 1192 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 NAA50Q9GZZ1 169 aaKnown RBP9.11□□□□□ -0.95
PDPN-212ENST00000621990 LHPPQ9H008 270 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 PLGRKTQ9HBL7 147 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 GULP1Q9UBP9 304 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 HSPE1-MOB4S4R3N1 261 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 KIAA1549LQ6ZVL6 1849 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 A0A1W2PPW3 197 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 TMX2-CTNND1H3BSU7 103 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ETHE1O95571 254 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 CISD3P0C7P0 127 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 LAMP1P11279 417 aa9.11□□□□□ -0.95
PDPN-212ENST00000621990 ITIH1P19827 911 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms