RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 SLC26A3P40879 764 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 AVPR1BP47901 424 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 CLCN7P51798 805 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 TSTA3Q13630 321 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 FASTKQ14296 549 aaKnown RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 LONRF1Q17RB8 773 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 ZNF425Q6IV72 752 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 SHISA6Q6ZSJ9 500 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 KCNMB4Q86W47 210 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 REXO1L1PQ8IX06 675 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 OR4N4Q8N0Y3 316 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 SLC34A3Q8N130 599 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 METTL27Q8N6F8 245 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 THAP11Q96EK4 314 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 CNDP1Q96KN2 507 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 TRIM56Q9BRZ2 755 aaKnown RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 FAM167BQ9BTA0 163 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 ZBTB20Q9HC78 741 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 TAC3Q9UHF0 121 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 TEKT2Q9UIF3 430 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 DHRS7Q9Y394 339 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 MRPS2Q9Y399 296 aaKnown RBP11.34□□□□□ -0.59
UPF3B-204ENST00000619445 JRKLQ9Y4A0 524 aa11.34□□□□□ -0.59
UPF3B-204ENST00000619445 GOLGA6L10A0A0M3HER8 536 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 E7ENX8 843 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 H0YIG0 161 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 GFYI3L273 518 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 SMAPO00193 183 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 KIF5CO60282 957 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 WFS1O76024 890 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 SLC16A8O95907 504 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 HEXBP07686 556 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 PRR35P0CG20 571 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 CCND1P24385 295 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 SKIV2L2P42285 1042 aaKnown RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 RGS4P49798 205 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 FOXL2P58012 376 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 ARG2P78540 354 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 TAP2Q03519 686 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 PTK6Q13882 451 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 SUSD1Q6UWL2 747 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 ADCK2Q7Z695 626 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 CAND1Q86VP6 1230 aaKnown RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 PALM2Q8IXS6 379 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 SUN3Q8TAQ9 357 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 GRHL3Q8TE85 626 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 ZNF480Q8WV37 535 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 METTL21AQ8WXB1 218 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 HAS2Q92819 552 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 MAGOHBQ96A72 148 aaKnown RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 MMABQ96EY8 250 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 OR2A5Q96R48 311 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 PKP4Q99569 1192 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 NAT9Q9BTE0 207 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 YIPF2Q9BWQ6 316 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 RNF32Q9H0A6 362 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 TMEM184CQ9NVA4 438 aa11.33□□□□□ -0.6
UPF3B-204ENST00000619445 C19orf25Q9UFG5 118 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 RUVBL1Q9Y265 456 aaKnown RBP11.33□□□□□ -0.6
UPF3B-204ENST00000619445 KCNE1BA0A087WTH5 132 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 A0A1B0GUH1 482 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 TCRBV7S3A2A0A539 114 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 A1L4Q6 167 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 PABPN1LA6NDY0 278 aaKnown RBP11.32□□□□□ -0.6
UPF3B-204ENST00000619445 AVILO75366 819 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 TTC4O95801 387 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SYF2O95926 243 aaKnown RBP11.32□□□□□ -0.6
UPF3B-204ENST00000619445 COX6A1P12074 109 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 CXCR5P32302 372 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SOX11P35716 441 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 VPS41P49754 854 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SKP1P63208 163 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
UPF3B-204ENST00000619445 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.62e-7■■□□□ 13.1
UPF3B-204ENST00000619445 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 LINC00696Q6ZRV3 163 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 LRRC8AQ8IWT6 810 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 FAM136AQ96C01 138 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SERPINB12Q96P63 405 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SLX1AQ9BQ83 275 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 TUBB6Q9BUF5 446 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 CCDC177Q9NQR7 707 aaPredicted RBP11.32□□□□□ -0.6
UPF3B-204ENST00000619445 OLAHQ9NV23 265 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 PCYOX1Q9UHG3 505 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
UPF3B-204ENST00000619445 NTNG1Q9Y2I2 539 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 SCN2AQ99250 2005 aa11.32□□□□□ -0.6
UPF3B-204ENST00000619445 IGHV1-45A0A0A0MS14 117 aa11.31□□□□□ -0.6
UPF3B-204ENST00000619445 IGKV1-8A0A0C4DH67 115 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms