RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 RMI1Q9H9A7 625 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 MAGEL2Q9UJ55 1249 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 CD207Q9UJ71 328 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 CNOT11Q9UKZ1 510 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 PCDHB14Q9Y5E9 798 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 CFAP20Q9Y6A4 193 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 PIPSLA2A3N6 862 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 AKAP10O43572 662 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 CEACAM5P06731 702 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SLC35G4P0C7Q5 338 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 UMPSP11172 480 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 ERGP11308 486 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 MAT2AP31153 395 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 KIR3DL1P43629 444 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 C21orf58P58505 322 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 RAE1P78406 368 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 MRPS21P82921 87 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SRSF11Q05519 484 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 MTAPQ13126 283 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SF1Q15637 639 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 DPY19L1Q2PZI1 675 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SPIN4Q56A73 249 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 PRAMEF14Q5SWL7 426 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 PRAMEF13Q5VWM6 474 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 CAPRIN2Q6IMN6 1127 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 HMBOX1Q6NT76 420 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 DNAJC14Q6Y2X3 702 aaPredicted RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 AMIGO2Q86SJ2 522 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 C1orf52Q8N6N3 182 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 FAM110BQ8TC76 370 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 EME1Q96AY2 570 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 TRIT1Q9H3H1 467 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 RPF2Q9H7B2 306 aaKnown RBP18.37■□□□□ 0.53
PSPC1-206ENST00000619300 FZD4Q9ULV1 537 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SLC17A4Q9Y2C5 497 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 ATG2BQ96BY7 2078 aa18.37■□□□□ 0.53
PSPC1-206ENST00000619300 SH3BGRLO75368 114 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 ACP5P13686 325 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 IGFALSP35858 605 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 ERMP1Q7Z2K6 904 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 TBC1D21Q8IYX1 336 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 C2orf73Q8N5S3 287 aaPredicted RBP18.36■□□□□ 0.53
PSPC1-206ENST00000619300 TRPV3Q8NET8 790 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 GATA6Q92908 595 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 BIRC7Q96CA5 298 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 INPP5KQ9BT40 448 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 APOOQ9BUR5 198 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 IKZF5Q9H5V7 419 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 SLC6A13Q9NSD5 602 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 NCKAP1Q9Y2A7 1128 aa18.36■□□□□ 0.53
PSPC1-206ENST00000619300 SLC31A1O15431 190 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 BMP2P12643 396 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OXTRP30559 389 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 FOLH1Q04609 750 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 CYP2A13Q16696 494 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 UGT8Q16880 541 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 GTDC1Q4AE62 458 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OR4F3Q6IEY1 312 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 USP30Q70CQ3 517 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ANKRD46Q86W74 232 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 TMEM132CQ8N3T6 1108 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 SLC44A3Q8N4M1 653 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 DTWD1Q8N5C7 304 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OR2T12Q8NG77 320 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OR7A2PQ8NGA2 310 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OR10A6Q8NH74 314 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 UBE2E3Q969T4 207 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 TIMM29Q9BSF4 260 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 VCXQ9H320 206 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 EIF4E1BA6NMX2 242 aaKnown RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 C2CD4DB7Z1M9 353 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ANXA4P09525 319 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ZNF26P17031 533 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 GGT1P19440 569 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ASMTP46597 345 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 HNRNPFP52597 415 aaKnown RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 MRPS35P82673 323 aaKnown RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 MEF2AQ02078 507 aaPredicted RBP18.35■□□□□ 0.53
PSPC1-206ENST00000619300 MED21Q13503 144 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 GALNT4Q8N4A0 578 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ANKFN1Q8N957 763 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 TNIP2Q8NFZ5 429 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 OR8J2Q8NGG1 315 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 NSMCE2Q96MF7 247 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 CCDC115Q96NT0 180 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 GBP5Q96PP8 586 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 KCNK12Q9HB15 430 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 FZD3Q9NPG1 666 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 DMRT3Q9NQL9 472 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 WDR37Q9Y2I8 494 aa18.35■□□□□ 0.53
PSPC1-206ENST00000619300 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-206ENST00000619300 KCNJ13O60928 360 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 GMNNO75496 209 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 C7P10643 843 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 CDH1P12830 882 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 HOXB9P17482 250 aaPredicted RBP18.34■□□□□ 0.53
PSPC1-206ENST00000619300 PTPN6P29350 595 aa18.34■□□□□ 0.53
PSPC1-206ENST00000619300 PIK3CBP42338 1070 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms