RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PGBD5Q8N414 524 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OR4K2Q8NGD2 314 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OR6K2Q8NGY2 324 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 NDNFQ8TB73 568 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 TUBB1Q9H4B7 451 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 RASSF1Q9NS23 344 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 VPS51Q9UID3 782 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 FCF1Q9Y324 198 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PCDHGC4Q9Y5F7 938 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 ISPDA4D126 451 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 AIREO43918 545 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PIP5K1CO60331 668 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC34A2O95436 690 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF24P17028 368 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CEBPBP17676 345 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DDX6P26196 483 aaKnown RBP eCLIP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 MAP2K4P45985 399 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LTBP2Q14767 1821 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 C5orf22Q49AR2 442 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 COLEC12Q5KU26 742 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CXorf57Q6NSI4 855 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TMEM207Q6UWW9 146 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 KIAA0907Q7Z7F0 614 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ADAMTSL2Q86TH1 951 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ZDHHC21Q8IVQ6 265 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 HS3ST5Q8IZT8 346 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 FAM9CQ8IZT9 166 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LPCAT1Q8NF37 534 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 WFDC5Q8TCV5 224 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DOCK6Q96HP0 2047 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ZSWIM3Q96MP5 696 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CITED4Q96RK1 184 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ATOH8Q96SQ7 321 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 OSBPL10Q9BXB5 764 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DCSTAMPQ9H295 470 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ATP13A3Q9H7F0 1226 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 REEP1Q9H902 201 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CPNE5Q9HCH3 593 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ANKHQ9HCJ1 492 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 KRT84Q9NSB2 600 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ANKMY1Q9P2S6 941 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ERVK-18Q9QC07 812 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SAMD4AQ9UPU9 718 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LAMA3Q16787 3333 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TAF4O00268 1085 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 MUSKO15146 869 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DFNA5O60443 496 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ULK1O75385 1050 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PRAMEF12O95522 483 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 NDST3O95803 873 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 HSMCR30P0CW71 290 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 HNRNPFP52597 415 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PPP5CP53041 499 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RPS3AP61247 264 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 COPZ1P61923 177 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RELBQ01201 579 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ARTNQ5T4W7 220 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 DEPDC1Q5TB30 811 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RTL10Q7L3V2 364 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 APCDD1Q8J025 514 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC7A5P1Q8MH63 180 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 OR8H2Q8N162 312 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TEX37Q96LM6 180 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PSKH2Q96QS6 385 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RETREG1Q9H6L5 497 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ABCB8Q9NUT2 735 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RAPGEFL1Q9UHV5 662 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SAMHD1Q9Y3Z3 626 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TRIM64A6NGJ6 449 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC28A1O00337 649 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 INSIG1O15503 277 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 IL6P05231 212 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 RPS17P08708 135 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 HOXA9P31269 272 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 NCS1P62166 190 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 EMX1Q04741 257 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LMAN2Q12907 356 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC13A2Q13183 592 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 HIST2H2ACQ16777 129 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF404Q494X3 552 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 INO80DQ53TQ3 878 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LY6G5CQ5SRR4 150 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ATXN7L2Q5T6C5 722 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 XAF1Q6GPH4 301 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 Q6ZNB5 142 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LINC00299Q6ZSB3 139 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 UTS2BQ765I0 119 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 STX19Q8N4C7 294 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TEX26Q8N6G2 289 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TTC29Q8NA56 475 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 SIDT2Q8NBJ9 832 aaKnown RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ARRDC2Q8TBH0 407 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 TANKQ92844 425 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 PEX13Q92968 403 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 LGALS12Q96DT0 336 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 CDKN2AIPNLQ96HQ2 116 aa6.79□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF382Q96SR6 550 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms