RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 METAP2P50579 478 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ALDH3A2P51648 485 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CCR9P51686 369 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NR0B1P51843 470 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 PMS1P54277 932 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC26A5P58743 744 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CD81P60033 236 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PSME3P61289 254 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 HERVK_113P63132 956 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NOMO3P69849 1222 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SRSF3P84103 164 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 RHDQ02161 417 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 HSF2Q03933 536 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ARID5AQ03989 594 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 FSTL1Q12841 308 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ILF3Q12906 894 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMC5-204ENST00000618375 LMAN2Q12907 356 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 GAGE1Q13065 139 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 DYRK1AQ13627 763 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SNTB1Q13884 538 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 VEPH1Q14D04 833 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NOMO1Q15155 1222 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SIX1Q15475 284 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 CARTPTQ16568 116 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SYT16Q17RD7 645 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LRRC26Q2I0M4 334 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF404Q494X3 552 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TRIM60Q495X7 471 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 HSF5Q4G112 596 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ATP13A5Q4VNC0 1218 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 KRTCAP3Q53RY4 240 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PAN3Q58A45 887 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 OR2B11Q5JQS5 317 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CATSPEREQ5SY80 951 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 FAXCQ5TGI0 409 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LIPJQ5W064 366 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 RAET1GQ6H3X3 334 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LAMTOR1Q6IAA8 161 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CENPPQ6IPU0 288 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 RPL13AP3Q6NVV1 102 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PMF1Q6P1K2 205 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SCYL2Q6P3W7 929 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 FAM111BQ6SJ93 734 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LMBR1LQ6UX01 489 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZBTB49Q6ZSB9 765 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 BRINP3Q76B58 766 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PDZD4Q76G19 769 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 TRILQ7L0X0 811 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PIWIL3Q7Z3Z3 882 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 CAMKMTQ7Z624 323 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SPRED1Q7Z699 444 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 DPPA2Q7Z7J5 298 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 AMIGO3Q86WK7 504 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 METTL23Q86XA0 190 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PSTKQ8IV42 348 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 GID4Q8IVV7 300 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SKA3Q8IX90 412 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 RDH10Q8IZV5 341 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CBARPQ8N350 705 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 STPG2Q8N412 459 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 LNX2Q8N448 690 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF655Q8N720 491 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 CNTD1Q8N815 330 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF781Q8N8C0 355 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 WDSUB1Q8N9V3 476 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CHDHQ8NE62 594 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZMIZ2Q8NF64 920 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 OR2L5Q8NG80 312 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 OR9A1PQ8NGU1 263 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 MCFD2Q8NI22 146 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TFB1MQ8WVM0 346 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC5A11Q8WWX8 675 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CPT1BQ92523 772 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF566Q969W8 418 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 MYLPFQ96A32 169 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PTERQ96BW5 349 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 RHBDF1Q96CC6 855 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 REPS1Q96D71 796 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 MTFMTQ96DP5 389 aaKnown RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 YIPF6Q96EC8 236 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TCEAL4Q96EI5 215 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SIPA1Q96FS4 1042 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC45A3Q96JT2 553 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CASD1Q96PB1 797 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF300Q96RE9 604 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 LMF1Q96S06 567 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 CPXM1Q96SM3 734 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 PFDN5Q99471 154 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 P2RY13Q9BPV8 354 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 TREX2Q9BQ50 279 aaPredicted RBP3.41□□□□□ -1.86
SMC5-204ENST00000618375 ZNF559Q9BR84 538 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 INPP5KQ9BT40 448 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SOX7Q9BT81 388 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 NAT9Q9BTE0 207 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 MENTQ9BUN1 341 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 EDEM2Q9BV94 578 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 SLC26A6Q9BXS9 759 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 HDHD5Q9BXW7 423 aa3.41□□□□□ -1.86
SMC5-204ENST00000618375 REG4Q9BYZ8 158 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms