RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 THAP6Q8TBB0 222 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 TCTEX1D2Q8WW35 142 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CREB3L1Q96BA8 519 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 PABPC5Q96DU9 382 aaKnown RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 TCEAL7Q9BRU2 100 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 HTATIP2Q9BUP3 242 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 FAM126AQ9BYI3 521 aaPredicted RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 MIOSQ9NXC5 875 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 RNGTTO60942 597 aaKnown RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 RRASP10301 218 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CD53P19397 219 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 WARSP23381 471 aaKnown RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 RYKP34925 604 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 ISL1P61371 349 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CDH17Q12864 832 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 FBXO48Q5FWF7 155 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 NOMO2Q5JPE7 1267 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 PRAMEF13Q5VWM6 474 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 TDRD10Q5VZ19 366 aaKnown RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 KANK2Q63ZY3 851 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CYB5R2Q6BCY4 276 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 NADSYN1Q6IA69 706 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 OTOP1Q7RTM1 612 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 NLRC3Q7RTR2 1065 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CPXCR1Q8N123 301 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 ZSCAN1Q8NBB4 408 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 OLIG1Q8TAK6 271 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 PIH1D2Q8WWB5 315 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 KAT2AQ92830 837 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 ARMC5Q96C12 935 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 PYCR2Q96C36 320 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 MYO19Q96H55 970 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 BBS4Q96RK4 519 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 MED18Q9BUE0 208 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 BCL2L14Q9BZR8 327 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
PDE6A-205ENST00000617647 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 DPAGT1Q9H3H5 408 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 PGAP2Q9UHJ9 254 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 SPATA31A1Q5TZJ5 1347 aa7.2□□□□□ -1.26
PDE6A-205ENST00000617647 CHD4Q14839 1912 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 GLYATL1P3A0A0U1RQE8 302 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 OR2A25A4D2G3 310 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 M0QZ92 97 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 PROM1O43490 865 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ULK1O75385 1050 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 PRKCGP05129 697 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TPOP07202 933 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 HTR1AP08908 422 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 CPB1P15086 417 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 YBX3P16989 372 aaKnown RBP eCLIP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 DCTP40126 519 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 GSTM5P46439 218 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 RGS6P49758 472 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 RPS8P62241 208 aaKnown RBP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TNFRSF17Q02223 184 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TNK1Q13470 666 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 COTL1Q14019 142 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SEC23BQ15437 767 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 GFOD2Q3B7J2 385 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 CRTC2Q53ET0 693 aaPredicted RBP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SLC35F1Q5T1Q4 408 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF549Q6P9A3 640 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 JAZF1Q86VZ6 243 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 GHDCQ8N2G8 530 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM132CQ8N3T6 1108 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TMEM151AQ8N4L1 468 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 OR52N1Q8NH53 320 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 STYXQ8WUJ0 223 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 MTFMTQ96DP5 389 aaKnown RBP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 TCEAL4Q96EI5 215 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ZNF251Q9BRH9 671 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 DPY30Q9C005 99 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ARL6Q9H0F7 186 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 C8orf33Q9H7E9 229 aaPredicted RBP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SARS2Q9NP81 518 aaKnown RBP7.19□□□□□ -1.26
PDE6A-205ENST00000617647 NANSQ9NR45 359 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 PCOLCE2Q9UKZ9 415 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ENTPD4Q9Y227 616 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 PTGDR2Q9Y5Y4 395 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SLC22A7Q9Y694 548 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ALDOBP05062 364 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SLC10A3P09131 477 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 JUNDP17535 347 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 HTR1EP28566 365 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SREBF1P36956 1147 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 KIR2DL3P43628 341 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 MASP1P48740 699 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 DIO3P55073 304 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SOX10P56693 466 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 GMFBP60983 142 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 UFM1P61960 85 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 RNF4P78317 190 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 ASAH1Q13510 395 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 SEMA5AQ13591 1074 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 DUOXA2Q1HG44 320 aa7.19□□□□□ -1.26
PDE6A-205ENST00000617647 OR52K2Q8NGK3 314 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms