RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 NOTCH4Q99466 2003 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 NINQ8N4C6 2090 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 KCNE1BA0A087WTH5 132 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 A0A096LPI6 279 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CLIC1O00299 241 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 LILRB3O75022 631 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 PRSS23O95084 383 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 FTH1P02794 183 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CTSAP10619 480 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ENGP17813 658 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 POLR2EP19388 210 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 PDHA2P29803 388 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 BNIP3Q12983 259 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 THOC6Q86W42 341 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CNIH3Q8TBE1 160 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 IRF7Q92985 503 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 PYURFQ96I23 114 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 TPD52L3Q96J77 140 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 THG1LQ9NWX6 298 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ABCG2Q9UNQ0 655 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CCDC88CQ9P219 2028 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ABHD14A-ACY1A0A1B0GW23 586 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ARHGEF33A8MVX0 844 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 NUAK1O60285 661 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 PRPS2P11908 318 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ZNF182P17025 639 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 SLC6A12P48065 614 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 IL5RAQ01344 420 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 GRIN2CQ14957 1233 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ACOX1Q15067 660 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ATG9BQ674R7 924 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ADIPOR2Q86V24 386 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 SH3KBP1Q96B97 665 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ZNF641Q96N77 438 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 CPEB1Q9BZB8 566 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 LHPPQ9H008 270 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 RIBC2Q9H4K1 309 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 TDP1Q9NUW8 608 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 ERVK-11Q9UQG0 969 aa13.45□□□□□ -0.26
CACNA1C-231ENST00000616390 TRBV5-3A0A0A0MS03 114 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 LOC100130705A0A1B0GUX0 176 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 SAP18O00422 153 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 XPNPEP2O43895 674 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ADH1AP07327 375 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 CTSLP07711 333 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 HNMTP50135 292 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 METAP1P53582 386 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 CD47Q08722 323 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 DOC2AQ14183 400 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 BROXQ5VW32 411 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 TTC23Q5W5X9 447 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 SVIPQ8NHG7 77 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 TMEM159Q96B96 161 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 RBM4BQ9BQ04 359 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 HEPHQ9BQS7 1158 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 RBM4Q9BWF3 364 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 SGK2Q9HBY8 427 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 BTBD3Q9Y2F9 522 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 IGLV3-16A0A075B6K0 115 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 GFYI3L273 518 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 YY2O15391 372 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 CLTBP09497 229 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 LAMP1P11279 417 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 GSSP48637 474 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 NUP107P57740 925 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 PPP2R2BQ00005 443 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ACSM2AQ08AH3 577 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 BCL2A1Q16548 175 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 UGT8Q16880 541 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 HKDC1Q2TB90 917 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ACSM2BQ68CK6 577 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ZC3H7AQ8IWR0 971 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 C2orf73Q8N5S3 287 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ADAMTS16Q8TE57 1224 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ZSWIM3Q96MP5 696 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 SPHK2Q9NRA0 654 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 VPS29Q9UBQ0 182 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 ERVW-1Q9UQF0 538 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
CACNA1C-231ENST00000616390 FAM220BPB1ANY3 271 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 PLK4O00444 970 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 KPNA3O00505 521 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 ETHE1O95571 254 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 SLC16A8O95907 504 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 NUDT7P0C024 238 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 TFPTP0C1Z6 253 aa13.43□□□□□ -0.26
CACNA1C-231ENST00000616390 FSHRP23945 695 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms