RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 TGM4P49221 684 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 FGL1Q08830 312 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 GANABQ14697 944 aaKnown RBP13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 PTGR1Q14914 329 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 C21orf62-AS1Q17RA5 79 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 LINC00469Q8N7U9 141 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZIM2Q9NZV7 527 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 SNX10Q9Y5X0 201 aa13.19□□□□□ -0.3
PPP4R3B-205ENST00000616288 CLCA1A8K7I4 914 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 EEF1E1O43324 174 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 DRD5P21918 477 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 KCNQ1P51787 676 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 PLD1Q13393 1074 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 UNC50Q53HI1 259 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 PDZD9Q8IXQ8 264 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 NANPQ8TBE9 248 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 FUZQ9BT04 418 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 PCDHGB3Q9Y5G1 929 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPATA31C2B4DYI2 1134 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 MATKP42679 507 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 PRMT2P55345 433 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 BCL2L1Q07817 233 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CBLBQ13191 982 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 PAN3Q58A45 887 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CDC73Q6P1J9 531 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TP53INP2Q8IXH6 220 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CDCA5Q96FF9 252 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TVP23BQ9NYZ1 205 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 LMO7Q8WWI1 1683 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 RP2O75695 350 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 RASGRP1O95267 797 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CPN2P22792 545 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 APEX1P27695 318 aaKnown RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CNTN2Q02246 1040 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TEKQ02763 1124 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CAPSQ13938 189 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 NTRK2Q16620 822 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 C6orf136Q5SQH8 315 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 FAM219BQ5XKK7 198 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZNF367Q7RTV3 350 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 VTCN1Q7Z7D3 282 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 SAMD14Q8IZD0 417 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TBC1D19Q8N5T2 526 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TTLQ8NG68 377 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 DPF3Q92784 378 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TADA1Q96BN2 335 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 LINGO1Q96FE5 620 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 CCM2Q9BSQ5 444 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 TMED9Q9BVK6 235 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 SDR39U1Q9NRG7 319 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZCWPW2A0A1B0GU75 182 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 LGALS8O00214 317 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 B4GALT5O43286 388 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 EEDO75530 441 aaKnown RBP13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 ASPAP45381 313 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 BAK1Q16611 211 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPATS1Q496A3 300 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 LCLAT1Q6UWP7 414 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 PYCR2Q96C36 320 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 LPIN3Q9BQK8 851 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 DPEP3Q9H4B8 488 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 LRTM1Q9HBL6 345 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 GLOD4Q9HC38 313 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 OSGIN1Q9UJX0 560 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 B4DXG7 233 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 ADAMDEC1O15204 470 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 SRCP12931 536 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 CBR1P16152 277 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 SPHARQ15513 63 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 ZBTB37Q5TC79 503 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 C3P1Q6ZMU1 363 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 BTN2A2Q8WVV5 523 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 SLC9A6Q92581 669 aa13.17□□□□□ -0.3
PPP4R3B-205ENST00000616288 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms