RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ZNF366Q8N895 744 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 ACVR1CQ8NER5 493 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 OR4C6Q8NH72 309 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 SHKBP1Q8TBC3 707 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 NEK7Q8TDX7 302 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 HDAC8Q9BY41 377 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 RASSF1Q9NS23 344 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 DNMT3BQ9UBC3 853 aaKnown RBP9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.89
TNFRSF9-204ENST00000615230 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 FAM159BA6NKW6 160 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 CYP17A1P05093 508 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 FHP07954 510 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 EEFSECP57772 596 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 OLR1P78380 273 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 FAM78AQ5JUQ0 283 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 MAGEE2Q8TD90 523 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 RBM4BQ9BQ04 359 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 RBM4Q9BWF3 364 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 MYH7P12883 1935 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 A0A0D9SEW6 157 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 HSMCR30P0CW71 290 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARSAP15289 507 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 DNASE1L1P49184 302 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 AFF3P51826 1226 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 PTCHD4Q6ZW05 846 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 IKBIPQ70UQ0 350 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 CLEC1AQ8NC01 280 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 LRRN4Q8WUT4 740 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 IGSF8Q969P0 613 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 KLHL42Q9P2K6 505 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 GSC2O15499 205 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 C1GALT1C1LP0DN25 315 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 CTBP2P56545 445 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 VSX2P58304 361 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 DNAJB13P59910 316 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 PPP3R1P63098 170 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 NPTX1Q15818 432 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 SH3PXD2AQ5TCZ1 1133 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 CEACAM20Q6UY09 585 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 TIFABQ6ZNK6 161 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 PDPRQ8NCN5 879 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 NANOS1Q8WY41 292 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 BORCS6Q96GS4 357 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 ACSS2Q9NR19 701 aa9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 NXT1Q9UKK6 140 aaKnown RBP9.46□□□□□ -0.9
TNFRSF9-204ENST00000615230 DHRS12A0PJE2 317 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PROCP04070 461 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 IL1R2P27930 398 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PSMB9P28065 219 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SPINT3P49223 89 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 NFATC4Q14934 902 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ABHD17BQ5VST6 288 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 GOLGA7Q7Z5G4 137 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PCED1AQ9H1Q7 454 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 KCNK13Q9HB14 408 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 CSNK1G1Q9HCP0 422 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ASB6Q9NWX5 421 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PTGFRNQ9P2B2 879 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ANKMY1Q9P2S6 941 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 HCN2Q9UL51 889 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 VIRMAQ69YN4 1812 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 G3V2T6 193 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PDCD5O14737 125 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PLIN3O60664 434 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SEMA3DO95025 777 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 FARS2O95363 451 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PABPC4LP0CB38 370 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 POU6F2P78424 691 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 HSF2Q03933 536 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SCARB2Q14108 478 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SYT16Q17RD7 645 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ALKAL1Q6UXT8 129 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 Q6ZSR6 202 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF572Q7Z3I7 529 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 THAP5Q7Z6K1 395 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC5A8Q8N695 610 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 NETO2Q8NC67 525 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ATP6V1C2Q8NEY4 427 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 STRA6Q9BX79 667 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 MAN2B2Q9Y2E5 1009 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 A0A087WXM4 84 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 TNFRSF11BO00300 401 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 TPD52L2O43399 206 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 AHSA1O95433 338 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 HMGN1P05114 100 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 GPIP06744 558 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SRFP11831 508 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 TYRP1P17643 537 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 RORAP35398 523 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 CDH13P55290 713 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 EFR3AQ14156 821 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 DCAF12Q5T6F0 453 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PAQR3Q6TCH7 311 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 LDB1Q86U70 411 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 TMEM25Q86YD3 366 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ANKFN1Q8N957 763 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms