RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CTAGE4Q8IX94 777 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ARHGEF39Q8N4T4 335 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ZFPM2Q8WW38 1151 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TCTN2Q96GX1 697 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 DPYSL5Q9BPU6 564 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 DOPEY2Q9Y3R5 2298 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 WASHC1A8K0Z3 465 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 UBXN8O00124 270 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ZW10O43264 779 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CREG1O75629 220 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 SIX3O95343 332 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 OTX2P32243 289 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 HSPA7P48741 367 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 IL2P60568 153 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CSNK1G2P78368 415 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 PRDX1Q06830 199 aaKnown RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CDC20Q12834 499 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ATP1A4Q13733 1029 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 TEX35Q5T0J7 233 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF425Q6IV72 752 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ZNF449Q6P9G9 518 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 OR9A4Q8NGU2 314 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 KIF18AQ8NI77 898 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 CALML6Q8TD86 181 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 DOK4Q8TEW6 326 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 N4BP2L2Q92802 583 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-208ENST00000614678 PLCD4Q9BRC7 762 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 RHOJQ9H4E5 214 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 IGSF5Q9NSI5 407 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 KCNMB2Q9Y691 235 aa5.44□□□□□ -1.54
CPNE3-208ENST00000614678 ATXN7O15265 892 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CPNE3O75131 537 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 WISP2O76076 250 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CD1DP15813 335 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SKIV2L2P42285 1042 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SLCO1A2P46721 670 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 PIK3CGP48736 1102 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 POLE2P56282 527 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ACY1Q03154 408 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SLC5A12Q1EHB4 618 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 PRR30Q53SZ7 412 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CYP4X1Q8N118 509 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SLC45A3Q96JT2 553 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 FOPNLQ96NB1 174 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CD180Q99467 661 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 GPR22Q99680 433 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SELENOSQ9BQE4 189 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ANKZF1Q9H8Y5 726 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 PARVBQ9HBI1 364 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 TBK1Q9UHD2 729 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 TCFL5Q9UL49 500 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ASH1LQ9NR48 2969 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CELSR2Q9HCU4 2923 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 KLHL33A6NCF5 533 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SGK494L7N484 410 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CATP04040 527 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SERPIND1P05546 499 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 MTHFD2P13995 350 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 RPA3P35244 121 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CCL11P51671 97 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ABHD18Q0P651 414 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 TGFBIQ15582 683 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CLPPQ16740 277 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ISCA2Q86U28 154 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SLC26A11Q86WA9 606 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 MYO1HQ8N1T3 1032 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SNRNP27Q8WVK2 155 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 NSUN5Q96P11 429 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CDK15Q96Q40 435 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 TSSK1BQ9BXA7 367 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SLC7A5P2Q9GIP4 190 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CUTCQ9NTM9 273 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 HCN3Q9P1Z3 774 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SERTAD3Q9UJW9 196 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 FARSAQ9Y285 508 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 TP53TG5Q9Y2B4 290 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 DCHS2Q6V1P9 2916 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SMIM23A6NLE4 172 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 FAM227AF5H4B4 570 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SBK3P0C264 359 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 MAP4P27816 1152 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 PTPN4P29074 926 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 Q0VFX4 171 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 NKAIN1Q4KMZ8 207 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 BROXQ5VW32 411 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 PRAMEF13Q5VWM6 474 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 FAM45BPQ6NSW5 357 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 LANCL3Q6ZV70 420 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ESX1Q8N693 406 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 FAM45AQ8TCE6 357 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 ADAMTS17Q8TE56 1095 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 UCN3Q969E3 161 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 LRRC39Q96DD0 335 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 UBXN10Q96LJ8 280 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 GPR78Q96P69 363 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SPSB2Q99619 263 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 SORBS1Q9BX66 1292 aaKnown RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 RAB17Q9H0T7 212 aa5.43□□□□□ -1.54
CPNE3-208ENST00000614678 RRAGDQ9NQL2 400 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-208ENST00000614678 CPSF2Q9P2I0 782 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms