RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 OR4K3Q96R72 315 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 SLC29A3Q9BZD2 475 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 SHCBP1LQ9BZQ2 653 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 EHD1Q9H4M9 534 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 UCK1Q9HA47 277 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 CPNE5Q9HCH3 593 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 TNFRSF12AQ9NP84 129 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 INTS7Q9NVH2 962 aaKnown RBP11.03□□□□□ -0.64
SLIRP-212ENST00000613856 OR6C2Q9NZP2 312 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 DOLKQ9UPQ8 538 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 TRAF6Q9Y4K3 522 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 KCNE2Q9Y6J6 123 aa11.03□□□□□ -0.64
SLIRP-212ENST00000613856 A0A1B0GTL3 188 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 A0A1W2PPV9 198 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 B4DGG1 531 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 TMEM233B4DJY2 109 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 HGSO14964 777 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CLGNO14967 610 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 NOBOXO60393 691 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 RFPL3O75679 317 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 OR4F21O95013 312 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CLDN9O95484 217 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 KITP10721 976 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 UROSP10746 265 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 GNAZP19086 355 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 PRDX3P30048 256 aaKnown RBP11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CASP2P42575 452 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 TBCCQ15814 346 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 UGT3A2Q3SY77 523 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-212ENST00000613856 LIPJQ5W064 366 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 KANSL1Q7Z3B3 1105 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 MILR1Q7Z6M3 343 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CACNA2D3Q8IZS8 1091 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 EID2Q8N6I1 236 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 ANKS4BQ8N8V4 417 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 FAM181AQ8N9Y4 354 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 OR4F6Q8NGB9 312 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 AGR3Q8TD06 166 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 LCN9Q8WX39 176 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 PATE1Q8WXA2 126 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 ATP6V1E2Q96A05 226 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 PLCD4Q9BRC7 762 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 ACTR8Q9H981 624 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 KCNK13Q9HB14 408 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 UCKL1Q9NWZ5 548 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 ARL2BPQ9Y2Y0 163 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 DYRK1BQ9Y463 629 aa11.02□□□□□ -0.65
SLIRP-212ENST00000613856 KCNE1BA0A087WTH5 132 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 PRAMEF33A0A0G2JMD5 474 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 TEX51A0A1B0GUA7 166 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 LILRA5A6NI73 299 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 E7EQ34 232 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 PRICKLE3O43900 615 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SDC3O75056 442 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 CRCPO75575 148 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 WFS1O76024 890 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 LDOC1O95751 146 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-212ENST00000613856 CHEK2O96017 543 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 HGFP14210 728 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 NPPBP16860 134 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 HNF4AP41235 474 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 ARFIP2P53365 341 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 AQP5P55064 265 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 FOXA1P55317 472 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 HHEXQ03014 270 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 BNIP3Q12983 259 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 GPR18Q14330 331 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 C6orf132Q5T0Z8 1188 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 ATG9BQ674R7 924 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 CLEC6AQ6EIG7 209 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 GRHL2Q6ISB3 625 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 EPGNQ6UW88 154 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SUSD1Q6UWL2 747 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SLCO4C1Q6ZQN7 724 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 TMEM26Q6ZUK4 368 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 AMIGO1Q86WK6 493 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 GPR156Q8NFN8 814 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 TWIST2Q8WVJ9 160 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SLC5A11Q8WWX8 675 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 NEIL2Q969S2 332 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SH3KBP1Q96B97 665 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 SEC16BQ96JE7 1060 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 MAELQ96JY0 434 aaKnown RBP11.01□□□□□ -0.65
SLIRP-212ENST00000613856 KCNA7Q96RP8 456 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 CCT7Q99832 543 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 EFCAB11Q9BUY7 163 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 TMEM120AQ9BXJ8 343 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 MEAF6Q9HAF1 191 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 PELI2Q9HAT8 420 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 DCTN4Q9UJW0 460 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 PCDHB11Q9Y5F2 797 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 DNAJC15Q9Y5T4 150 aa11.01□□□□□ -0.65
SLIRP-212ENST00000613856 COL27A1Q8IZC6 1860 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-212ENST00000613856 A0A0G2JND7 137 aa11□□□□□ -0.65
SLIRP-212ENST00000613856 RRP8O43159 456 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms