RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 ANKZF1Q9H8Y5 726 aa2.85□□□□□ -1.95
TARDBP-214ENST00000613177 CTSZQ9UBR2 303 aa2.85□□□□□ -1.95
TARDBP-214ENST00000613177 MORF4L1Q9UBU8 362 aa2.85□□□□□ -1.95
TARDBP-214ENST00000613177 PPIEQ9UNP9 301 aaKnown RBP2.85□□□□□ -1.95
TARDBP-214ENST00000613177 CSNK1G3Q9Y6M4 447 aa2.85□□□□□ -1.95
TARDBP-214ENST00000613177 MEIS2O14770 477 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 PSMD10O75832 226 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 SMIM18P0DKX4 95 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 GLULP15104 373 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 LIG4P49917 911 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 HNRNPKP61978 463 aaKnown RBP eCLIP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 CSNK2BP67870 215 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 AIMP1Q12904 312 aaKnown RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 PRPF4BQ13523 1007 aaKnown RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 ITGA7Q13683 1181 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 MTF1Q14872 753 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 HERC3Q15034 1050 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 UGT3A2Q3SY77 523 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 SLC35D3Q5M8T2 416 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 DMKNQ6E0U4 476 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 MFSD12Q6NUT3 480 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 FRRS1Q6ZNA5 592 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 G2E3Q7L622 706 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 PLPPR4Q7Z2D5 763 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 RTN4RL2Q86UN3 420 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 THAP8Q8NA92 274 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 Q8NFD4 153 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 OR13C3Q8NGS6 347 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 OR6S1Q8NH40 331 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 OR1L3Q8NH93 324 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 TOMM40LQ969M1 308 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 ZNF830Q96NB3 372 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 DGAT2Q96PD7 388 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 GPR88Q9GZN0 384 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 PIH1D3Q9NQM4 214 aaKnown RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 OLAHQ9NV23 265 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 HAO2Q9NYQ3 351 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 WDR35Q9P2L0 1181 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 ZNF107Q9UII5 783 aaPredicted RBP2.84□□□□□ -1.95
TARDBP-214ENST00000613177 ANAPC2Q9UJX6 822 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 STUB1Q9UNE7 303 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 PADI2Q9Y2J8 665 aa2.84□□□□□ -1.95
TARDBP-214ENST00000613177 HCFC1P51610 2035 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 hCG_1809904A0A1W2PP81 198 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 A0A1W2PPE2 198 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 A0A1W2PPM1 405 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 A0A1W2PR64 198 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 URADA6NGE7 173 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 UBE2CO00762 179 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 PTGESO14684 152 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 EPHB6O15197 1021 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 DKC1O60832 514 aaKnown RBP eCLIP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 KRT33AO76009 404 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 APOA4P06727 396 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 RAB40ALP0C0E4 278 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 THEGLP0DJG4 465 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 HAPLN1P10915 354 aaPredicted RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 DNASE1P24855 282 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 MPZP25189 248 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 CSTF2P33240 577 aaKnown RBP eCLIP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 KLC1Q07866 573 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 CD300CQ08708 224 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 MTHFSDQ2M296 383 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 LCN1P1Q5VSP4 162 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 PRPF39Q86UA1 669 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 CDK20Q8IZL9 346 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 AVL9Q8NBF6 648 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 GPRC5AQ8NFJ5 357 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 SYN2Q92777 582 aaPredicted RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 NXNL1Q96CM4 212 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 FAM20AQ96MK3 541 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 NECTIN4Q96NY8 510 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 PANK2Q9BZ23 570 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 ANKRD2Q9GZV1 360 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 FAM49AQ9H0Q0 323 aaPredicted RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 GOLPH3LQ9H4A5 285 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 NOL11Q9H8H0 719 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 MYNNQ9NPC7 610 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 PPANQ9NQ55 473 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 FAM207AQ9NSI2 230 aaPredicted RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 MRGBPQ9NV56 204 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 C5AR2Q9P296 337 aa2.83□□□□□ -1.96
TARDBP-214ENST00000613177 CPSF2Q9P2I0 782 aaKnown RBP2.83□□□□□ -1.96
TARDBP-214ENST00000613177 LOC105371242A0A075B767 164 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 A0A087WUV0 522 aaPredicted RBP2.82□□□□□ -1.96
TARDBP-214ENST00000613177 H7C0S8 307 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 ARPC2O15144 300 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 GPRIN2O60269 458 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 DIAPH2O60879 1101 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 TBX10O75333 385 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 PRB2P02812 416 aaPredicted RBP2.82□□□□□ -1.96
TARDBP-214ENST00000613177 ABCB1P08183 1280 aaPredicted RBP2.82□□□□□ -1.96
TARDBP-214ENST00000613177 PTPN3P26045 913 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 HLA-FP30511 346 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 PTGER4P35408 488 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 ETV5P41161 510 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 RPL21P46778 160 aaKnown RBP2.82□□□□□ -1.96
TARDBP-214ENST00000613177 GCNT1Q02742 428 aa2.82□□□□□ -1.96
TARDBP-214ENST00000613177 CALD1Q05682 793 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 333.2 ms