RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ASNA1O43681 348 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 PHF2O75151 1096 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 TPM1P09493 284 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 HOXB4P17483 251 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 PSMA3P25788 255 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 AOAHP28039 575 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 HADHBP55084 474 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 HSF1Q00613 529 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 OC90Q02509 493 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 CCSMST1Q4G0I0 132 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 DOLPP1Q86YN1 238 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 MMP21Q8N119 569 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 DNAAF3Q8N9W5 541 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 HDAC10Q969S8 669 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 RERGQ96A58 199 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 SCMH1Q96GD3 660 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 OSBPL8Q9BZF1 889 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 RUVBL2Q9Y230 463 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 NFS1Q9Y697 457 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 ANKHD1Q8IWZ3 2542 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 SCN3AQ9NY46 2000 aa16.28■□□□□ 0.2
CSNK1E-215ENST00000612795 A0A1W2PPV9 198 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 FOXO6A8MYZ6 492 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 SLCO2B1O94956 709 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 C1orf105O95561 183 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 METTL18O95568 372 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 GAS8O95995 478 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 CCNFP41002 786 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 ST13P50502 369 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 EFNA3P52797 238 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MAT1AQ00266 395 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 FASTKQ14296 549 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MEP1AQ16819 746 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 P3H1Q32P28 736 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MINDY4Q4G0A6 757 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 GARNL3Q5VVW2 1013 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 PLAG1Q6DJT9 500 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 SPINK14Q6IE38 97 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 LRRC8BQ6P9F7 803 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 LANCL3Q6ZV70 420 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 GALNTL5Q7Z4T8 443 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 TAB3Q8N5C8 712 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 OR13J1Q8NGT2 312 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 OR6P1Q8NGX9 317 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 OR4L1Q8NH43 312 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MAGEC3Q8TD91 643 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 FOPNLQ96NB1 174 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 DMRTA2Q96SC8 542 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 TRIM51Q9BSJ1 452 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 MRPS30Q9NP92 439 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 SPATA7Q9P0W8 599 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
CSNK1E-215ENST00000612795 ABCA2Q9BZC7 2435 aa16.27■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF469Q96JG9 3925 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 PSMD3O43242 534 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 SUN1O94901 812 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF24P17028 368 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 CD96P40200 585 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 YBX1P67809 324 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 PRAMEP78395 509 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 TSTA3Q13630 321 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 PTRHD1Q6GMV3 140 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 C11orf63Q6NUN7 778 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 FBXO42Q6P3S6 717 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 CPEB2Q7Z5Q1 589 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 LINC00523Q86TU6 105 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 CRLF3Q8IUI8 442 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 SIAH3Q8IW03 269 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 HORMAD2Q8N7B1 307 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 PANX3Q96QZ0 392 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 TMEM121Q9BTD3 319 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 TMUB1Q9BVT8 246 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 VN1R1Q9GZP7 353 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 SLC2A6Q9UGQ3 507 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 ANAPC5Q9UJX4 755 aa16.26■□□□□ 0.19
CSNK1E-215ENST00000612795 A0A0U1RQJ8 604 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 FOXS1O43638 330 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 DRD2P14416 443 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 RPA3P35244 121 aaPredicted RBP16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 AVPR1BP47901 424 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 SEMA3AQ14563 771 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 AARS2Q5JTZ9 985 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 H3F3CQ6NXT2 135 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM71DQ8N9W8 422 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 CHDHQ8NE62 594 aaPredicted RBP16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 OR52K1Q8NGK4 314 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 PLCD4Q9BRC7 762 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 UTP6Q9NYH9 597 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 TNFRSF10DQ9UBN6 386 aa16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 TSR3Q9UJK0 312 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-215ENST00000612795 PHF3Q92576 2039 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 FAM90A27PA6NNH2 459 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 GABRR3A8MPY1 467 aa16.24■□□□□ 0.19
CSNK1E-215ENST00000612795 TXNDC9O14530 226 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms