RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ALPPP05187 535 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 FBLP22087 321 aaKnown RBP11.78□□□□□ -0.52
CBWD3-208ENST00000612050 MAGEA4P43358 317 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 AVPR1BP47901 424 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 HNMTP50135 292 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 CCL11P51671 97 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 PGDP52209 483 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ARF3P61204 181 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-208ENST00000612050 NAE1Q13564 534 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 GRTP1Q5TC63 336 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF385CQ66K41 422 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-208ENST00000612050 FRMPD2BQ6IN97 320 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 TCTN3Q6NUS6 607 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 LCTLQ6UWM7 567 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 OVCH1Q7RTY7 1134 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 PAQR7Q86WK9 346 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 HPS6Q86YV9 775 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 CAMKVQ8NCB2 501 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 FBXO25Q8TCJ0 367 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF285Q96NJ3 590 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ATG10Q9H0Y0 220 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF71Q9NQZ8 489 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-208ENST00000612050 GRHL1Q9NZI5 618 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 CTNNAL1Q9UBT7 734 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF282Q9UDV7 671 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ADAMTS6Q9UKP5 1117 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 PCDHGB7Q9Y5F8 929 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 ZFYVE26Q68DK2 2539 aa11.78□□□□□ -0.52
CBWD3-208ENST00000612050 TCRBV9S1A1TA0A576 114 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 H7BY64 318 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 J3QKU1 62 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 FURINP09958 794 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 SLC35G6P0C7Q6 338 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 CCR8P51685 355 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 GUCY2DQ02846 1103 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 KLRB1Q12918 225 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 CSHL1Q14406 222 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 GLE1Q53GS7 698 aaKnown RBP11.77□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF425Q6IV72 752 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 LCN10Q6JVE6 187 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 ASB18Q6ZVZ8 466 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 RAPH1Q70E73 1250 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 TCAIMQ8N3R3 496 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 PPM1NQ8N819 430 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 CEP112Q8N8E3 955 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 MIEF2Q96C03 454 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 FBXL8Q96CD0 374 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 PRAP1Q96NZ9 151 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 RBBP8Q99708 897 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 OLFM1Q99784 485 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 WDR83Q9BRX9 315 aaKnown RBP11.77□□□□□ -0.52
CBWD3-208ENST00000612050 DRC3Q9H069 523 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 CNOT10Q9H9A5 744 aaKnown RBP11.77□□□□□ -0.52
CBWD3-208ENST00000612050 PRM3Q9NNZ6 103 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 ENAMQ9NRM1 1142 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 SEMA3GQ9NS98 782 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 ZNF451Q9Y4E5 1061 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 PSAT1Q9Y617 370 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 IKBKGQ9Y6K9 419 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 SPTBP11277 2137 aa11.77□□□□□ -0.52
CBWD3-208ENST00000612050 IGSF10Q6WRI0 2623 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 LOC105369274A0A096LPK9 316 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TP73O15350 636 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 IPO13O94829 963 aaKnown RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 CAPN1P07384 714 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 CXCR2P25025 360 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TAS2R39P59534 338 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 ATP6V0D1P61421 351 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 CDKL1Q00532 357 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 SLC7A5Q01650 507 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 SLMAPQ14BN4 828 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 RBBP7Q16576 425 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 NIPAL1Q6NVV3 410 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 MRPL14Q6P1L8 145 aaKnown RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 FBXO42Q6P3S6 717 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TAOK1Q7L7X3 1001 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TBC1D1Q86TI0 1168 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 PTRH1Q86Y79 214 aaKnown RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 OR4N4Q8N0Y3 316 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 METTL27Q8N6F8 245 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TM9SF4Q92544 642 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 MMABQ96EY8 250 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 LRRC1Q9BTT6 524 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 CAPS2Q9BXY5 557 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 SLC26A1Q9H2B4 701 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 PLAC1Q9HBJ0 212 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 C14orf105Q9NVL8 296 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 TP53TG5Q9Y2B4 290 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 OARD1Q9Y530 152 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.53
CBWD3-208ENST00000612050 KCNE2Q9Y6J6 123 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
CBWD3-208ENST00000612050 NPEPPSL1A6NEC2 478 aa11.76□□□□□ -0.53
CBWD3-208ENST00000612050 URADA6NGE7 173 aa11.76□□□□□ -0.53
CBWD3-208ENST00000612050 FAM159BA6NKW6 160 aa11.76□□□□□ -0.53
CBWD3-208ENST00000612050 PCDH17O14917 1159 aa11.76□□□□□ -0.53
CBWD3-208ENST00000612050 HAT1O14929 419 aa11.76□□□□□ -0.53
CBWD3-208ENST00000612050 H2AFYO75367 372 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms