RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GSTM5P46439 218 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ASMTP46597 345 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 NKX2-5P52952 324 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 COPZ1P61923 177 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 YBX1P67809 324 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HSPB3Q12988 150 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CLCA4Q14CN2 919 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PLEKHG6Q3KR16 790 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 C6orf183Q5T699 404 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ATG9BQ674R7 924 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 MED27Q6P2C8 311 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 KRT73Q86Y46 540 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RAB42Q8N4Z0 105 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 LKAAEAR1Q8TD35 194 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RIOK2Q9BVS4 552 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC2A11Q9BYW1 496 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TM9SF3Q9HD45 589 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ASAH2Q9NR71 780 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PAK1IP1Q9NWT1 392 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SLCO3A1Q9UIG8 710 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SARDHQ9UL12 918 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 LYVE1Q9Y5Y7 322 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SCAMP1O15126 338 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 AP2A2O94973 939 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 POP4O95707 220 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 IGLV3-25P01717 112 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 C9P02748 559 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 KLKB1P03952 638 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 IFNW1P05000 195 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RPLP0P05388 317 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 IMPDH2P12268 514 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HOXD8P13378 290 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 BUD31P41223 144 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RXRGP48443 463 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PTPN5P54829 565 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ADAM17P78536 824 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF404Q494X3 552 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TPRG1LQ5T0D9 272 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIQKQ629K1 86 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 NCEH1Q6PIU2 408 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SUSD1Q6UWL2 747 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 Q6ZPB1 254 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 NANOGNBQ7Z5D8 188 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 THOC6Q86W42 341 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TEX26Q8N6G2 289 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 NFKBIDQ8NI38 313 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CD99L2Q8TCZ2 262 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CYB5D2Q8WUJ1 264 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RHBDF1Q96CC6 855 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RDH12Q96NR8 316 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC35A5Q9BS91 424 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 MCMBPQ9BTE3 642 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 OSBPL10Q9BXB5 764 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC29A3Q9BZD2 475 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RNF38Q9H0F5 515 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TMEM245Q9H330 911 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TEKT2Q9UIF3 430 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CORO2BQ9UQ03 480 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RNF6Q9Y252 685 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 WBP11Q9Y2W2 641 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 A0A096LPI6 279 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 OR7A17O14581 309 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ATG13O75143 517 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 STSP08842 583 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 LAMP1P11279 417 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PABPC1P11940 636 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PORP16435 677 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 DDX5P17844 614 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ACRV1P26436 265 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HTR1BP28222 390 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 EMX1Q04741 257 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PCBP2Q15366 365 aaKnown RBP eCLIP6.66□□□□□ -1.344e-11■■■■■ 46.3
SYNPO2-206ENST00000610556 PYDC2Q56P42 97 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF57Q68EA5 555 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 NEK5Q6P3R8 708 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 AGTRAPQ6RW13 159 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TPRG1Q6ZUI0 275 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TMCO2Q7Z6W1 182 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ARMC8Q8IUR7 673 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF513Q8N8E2 541 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 DCAF4L2Q8NA75 395 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 TRPV1Q8NER1 839 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF461Q8TAF7 563 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 MYLIPQ8WY64 445 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 UBE2FQ969M7 185 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 FEVQ99581 238 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ITPAQ9BY32 194 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ACPTQ9BZG2 426 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HDHD2Q9H0R4 259 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 RBM38Q9H0Z9 239 aaKnown RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HEBP1Q9NRV9 189 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 HSFX1Q9UBD0 423 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CRNNQ9UBG3 495 aaPredicted RBP6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SEC14L3Q9UDX4 400 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 MALT1Q9UDY8 824 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 ABCG2Q9UNQ0 655 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms