RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OR9Q2Q8NGE9 314 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 IL1RAPQ9NPH3 570 aa19.79■□□□□ 0.76
SSBP3-216ENST00000610401 AP3D1O14617 1153 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 SLC16A6O15403 523 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 PRAMEF4O60810 478 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 IGLV3-27P01718 113 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 RETP07949 1114 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 EPORP19235 508 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 CCR7P32248 378 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 RYKP34925 604 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 SLC11A1P49279 550 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 FLT3LGP49771 235 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 ZNF404Q494X3 552 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 UBE2UQ5VVX9 321 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 PRAMEF9Q5VWM5 478 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 NCEH1Q6PIU2 408 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 SNX20Q7Z614 316 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 LYSMD2Q8IV50 215 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 STX19Q8N4C7 294 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 ATL1Q8WXF7 558 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 TSEN34Q9BSV6 310 aaKnown RBP19.78■□□□□ 0.76
SSBP3-216ENST00000610401 SAMD4AQ9UPU9 718 aaKnown RBP19.78■□□□□ 0.76
SSBP3-216ENST00000610401 RNF6Q9Y252 685 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 A0A1B0GVM2 712 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 GAPDHSO14556 408 aaPredicted RBP19.78■□□□□ 0.76
SSBP3-216ENST00000610401 FEN1P39748 380 aaKnown RBP19.78■□□□□ 0.76
SSBP3-216ENST00000610401 CLCN4P51793 760 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 BCL2L1Q07817 233 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 SMARCB1Q12824 385 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 TPRG1LQ5T0D9 272 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 KIAA1841Q6NSI8 718 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 STK40Q8N2I9 435 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 RHOXF1Q8NHV9 184 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 BEX2Q9BXY8 128 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 DUSP21Q9H596 190 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 DNMT3AQ9Y6K1 912 aaPredicted RBP19.78■□□□□ 0.76
SSBP3-216ENST00000610401 PTPRDP23468 1912 aa19.78■□□□□ 0.76
SSBP3-216ENST00000610401 RFXAPO00287 272 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 CTDSP2O14595 271 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 ERN1O75460 977 aaKnown RBP19.77■□□□□ 0.76
SSBP3-216ENST00000610401 PBLDP30039 288 aaPredicted RBP19.77■□□□□ 0.76
SSBP3-216ENST00000610401 DNAJA1P31689 397 aaKnown RBP19.77■□□□□ 0.76
SSBP3-216ENST00000610401 TAB1Q15750 504 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 VMACQ2NL98 169 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 ATP13A5Q4VNC0 1218 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 NOXRED1Q6NXP6 359 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 FUT10Q6P4F1 479 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 NEK10Q6ZWH5 1172 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 ZSWIM9Q86XI8 627 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 AUTS2Q8WXX7 1259 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 STARD8Q92502 1023 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 RDH12Q96NR8 316 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 KCNH6Q9H252 994 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 TMA7Q9Y2S6 64 aaKnown RBP19.77■□□□□ 0.76
SSBP3-216ENST00000610401 PATJQ8NI35 1801 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 GNG14A0A1W2PPG7 69 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 MAGEB17A8MXT2 336 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 GFRA2O00451 464 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 KCNK5O95279 499 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 MXD1Q05195 221 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 C2orf73Q8N5S3 287 aaPredicted RBP19.77■□□□□ 0.76
SSBP3-216ENST00000610401 BTBD2Q9BX70 525 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 NDEL1Q9GZM8 345 aa19.77■□□□□ 0.76
SSBP3-216ENST00000610401 CCNDBP1O95273 360 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 HIST1H2AGP0C0S8 130 aaPredicted RBP19.77■□□□□ 0.75
SSBP3-216ENST00000610401 GJA1P17302 382 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 HIST1H2ADP20671 130 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 PPP3CCP48454 512 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 MFSD14CQ5VZR4 134 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 ATG9BQ674R7 924 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 KDM4DQ6B0I6 523 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 APH1BQ8WW43 257 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 HIST1H2AHQ96KK5 128 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 IL4I1Q96RQ9 567 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 HIST1H2AJQ99878 128 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 H2AFJQ9BTM1 129 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 LHX3Q9UBR4 397 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 FZD4Q9ULV1 537 aa19.77■□□□□ 0.75
SSBP3-216ENST00000610401 NPIPB15A6NHN6 443 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 FAM220BPB1ANY3 271 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 H3BM21 787 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 PTHP01270 115 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 S100A5P33763 92 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 NRIP1P48552 1158 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ABHD18Q0P651 414 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ZNF852Q6ZMS4 543 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 NANOGNBQ7Z5D8 188 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 TMCO2Q7Z6W1 182 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 HMGN2P46Q86SG4 172 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 SLC5A8Q8N695 610 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 LILRA3Q8N6C8 439 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 GLB1L3Q8NCI6 653 aaPredicted RBP19.76■□□□□ 0.75
SSBP3-216ENST00000610401 P2RY13Q9BPV8 354 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 NECTIN3Q9NQS3 549 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 ILVBLA1L0T0 632 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 PCDH7O60245 1069 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 EBLN1P0CF75 366 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 CKBP12277 381 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 PPP5CP53041 499 aa19.76■□□□□ 0.75
SSBP3-216ENST00000610401 CLDN8P56748 225 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms