RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ITGA11Q9UKX5 1188 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 HEG1Q9ULI3 1381 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 KIAA1210Q9ULL0 1709 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 CLSPNQ9HAW4 1339 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 IGHV4-4A0A075B6R2 117 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 PRR23AA6NEV1 266 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 CDC123O75794 336 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 CDK2AP2O75956 126 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 AMBPP02760 352 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 HMBSP08397 361 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 FAM200BP0CF97 657 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 MUTP22033 750 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 TIA1P31483 386 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 CTNNA1P35221 906 aaKnown RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 KRT2P35908 639 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 CETN2P41208 172 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 SULT2A1Q06520 285 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 XKR6Q5GH73 641 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 NHSL2Q5HYW2 709 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 CYB5D1Q6P9G0 228 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 C11orf88Q6PI97 169 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 TMEM207Q6UWW9 146 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 KLHDC8BQ8IXV7 354 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 APCDD1Q8J025 514 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 NHLRC2Q8NBF2 726 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 TMEM178AQ8NBL3 297 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 SLC26A7Q8TE54 656 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 DYRK2Q92630 601 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 DNASE1L2Q92874 299 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 RIT1Q92963 219 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 P2RX5Q93086 422 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 C4orf45Q96LM5 186 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 AK8Q96MA6 479 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 MLPHQ9BV36 600 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 SDCBP2Q9H190 292 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 COPS7BQ9H9Q2 264 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF71Q9NQZ8 489 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 ARMCX3Q9UH62 379 aaPredicted RBP3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 MAN1B1Q9UKM7 699 aa3.82□□□□□ -1.8
SMCHD1-213ENST00000609587 HHLA1C9JL84 531 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 F8VVB4 439 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 F8VWA3 439 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CCL24O00175 119 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 FPGTO14772 594 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 FLRT2O43155 660 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 SLC7A4O43246 635 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 STX6O43752 255 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 SELENOFO60613 162 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 AP2A2O94973 939 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 TGDSO95455 350 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 C9P02748 559 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 SUPT20HL2P0C7V6 817 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 ALDH1B1P30837 517 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CDX1P47902 265 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 KRT83P78385 493 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 MYL7Q01449 175 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 OPCMLQ14982 345 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 TEAD2Q15562 447 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CDC37Q16543 378 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 GPR33Q49SQ1 333 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 ARHGAP17Q68EM7 881 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF790Q6PG37 636 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CCDC63Q8NA47 563 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 OR7A2PQ8NGA2 310 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 FAM76AQ8TAV0 307 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 GDAP1Q8TB36 358 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 METTL21AQ8WXB1 218 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 TMEM190Q8WZ59 177 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CENPTQ96BT3 561 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 VMP1Q96GC9 406 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 GDAP1L1Q96MZ0 367 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 NDNQ99608 321 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CDK19Q9BWU1 502 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 RIMS4Q9H426 269 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 CDH7Q9ULB5 785 aa3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 ZFP37Q9Y6Q3 630 aaPredicted RBP3.81□□□□□ -1.8
SMCHD1-213ENST00000609587 TRBV5-5A0A0J9YX44 114 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 OOEPA6NGQ2 149 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 YDJCA8MPS7 323 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 C17orf105B2RV13 164 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 C2CD4DB7Z1M9 353 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 TMEM150CB9EJG8 249 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 H0YAE9 185 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 SLC30A4O14863 429 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 EXTL3O43909 919 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 BAG3O95817 575 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 CEACAM1P13688 526 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 GNB3P16520 340 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 ATP5DP30049 168 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 SFTPDP35247 375 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 DNA2P51530 1060 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 LBX1P52954 281 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 GNB1P62873 340 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 SP3Q02447 781 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 FAM166AQ6J272 317 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 CASC4Q6P4E1 433 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 CASC1Q6TDU7 716 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 BTNL8Q6UX41 500 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms