RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 MTHFD2P13995 350 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 TAC1P20366 129 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 CXCR2P25025 360 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 GDF5P43026 501 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 ARSFP54793 590 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 RPS15AP62244 130 aaKnown RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 CSNK1G2P78368 415 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 CDC16Q13042 620 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 GRM7Q14831 915 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 YOD1Q5VVQ6 348 aaPredicted RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 METTL2BQ6P1Q9 378 aaKnown RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 C6orf15Q6UXA7 325 aaPredicted RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 DTX1Q86Y01 620 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 UBTD2Q8WUN7 234 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 NEIL2Q969S2 332 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 CLIP3Q96DZ5 547 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 LRFN5Q96NI6 719 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 TMEM79Q9BSE2 394 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 NDC1Q9BTX1 674 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 SPRY4Q9C004 299 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 ACTR5Q9H9F9 607 aaPredicted RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 PELI2Q9HAT8 420 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 CPSF2Q9P2I0 782 aaKnown RBP13.66□□□□□ -0.22
CTSA-219ENST00000607841 OPTCQ9UBM4 332 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 LGALS13Q9UHV8 139 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 SRPK3Q9UPE1 567 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 RAXQ9Y2V3 346 aa13.66□□□□□ -0.22
CTSA-219ENST00000607841 KCNE1BA0A087WTH5 132 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 K7EPI3 171 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 HAT1O14929 419 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 CLGNO14967 610 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 CTIFO43310 598 aaKnown RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 ZNF749O43361 778 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 HCRTR1O43613 425 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 TIAF1O95411 115 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 DLGAP3O95886 979 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 NTRK1P04629 796 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 KLK3P07288 261 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 ZNF28P17035 718 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 KRT4P19013 534 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 VSX2P58304 361 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 SETDB1Q15047 1291 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 PDK4Q16654 411 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 FAM214AQ32MH5 1076 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 C18orf21Q32NC0 220 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 KRT71Q3SY84 523 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 BEND6Q5SZJ8 279 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 NXPE4Q6UWF7 544 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 TMPRSS11BQ86T26 416 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 IQCKQ8N0W5 287 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 IL22RA1Q8N6P7 574 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 ZNF655Q8N720 491 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 SNX31Q8N9S9 440 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 OR4K1Q8NGD4 311 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 ESAMQ96AP7 390 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 NAF1Q96HR8 494 aaKnown RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 ZNF285Q96NJ3 590 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 OR2A5Q96R48 311 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 AIF1LQ9BQI0 150 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 SPRTNQ9H040 489 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 TXLNGQ9NUQ3 528 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 TMEM216Q9P0N5 145 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 GRID1Q9ULK0 1009 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 ANGPTL3Q9Y5C1 460 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 WDFY3Q8IZQ1 3526 aa13.65□□□□□ -0.22
CTSA-219ENST00000607841 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
CTSA-219ENST00000607841 H0YGG7 62 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 H3BMH7 237 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 STX16-NPEPL1H3BU86 382 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 TK2O00142 265 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 TAF4O00268 1085 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 COPEO14579 308 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 STX16O14662 325 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 KLK10O43240 276 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 NRP2O60462 931 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 KATNA1O75449 491 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
CTSA-219ENST00000607841 C1GALT1C1LP0DN25 315 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 EPB42P16452 691 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 CRHR1P34998 444 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 PIK3CGP48736 1102 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 ARF3P61204 181 aaPredicted RBP13.64□□□□□ -0.23
CTSA-219ENST00000607841 ZNF844Q08AG5 666 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 ABHD18Q0P651 414 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 CLN3Q13286 438 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 PCBP2Q15366 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTSA-219ENST00000607841 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 CATSPEREQ5SY80 951 aa13.64□□□□□ -0.23
CTSA-219ENST00000607841 BROXQ5VW32 411 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms