RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 UFD1Q92890 307 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TMBIM1Q969X1 311 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ISG20Q96AZ6 181 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 FAM149B1Q96BN6 582 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TESCQ96BS2 214 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 REPS1Q96D71 796 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MARK4Q96L34 752 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 B3GALT6Q96L58 329 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLHL15Q96M94 604 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SPATA13Q96N96 652 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TSNARE1Q96NA8 513 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CCDC115Q96NT0 180 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 QKIQ96PU8 341 aaKnown RBP eCLIP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ADOQ96SZ5 270 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 PTPN18Q99952 460 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC30A2Q9BRI3 323 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF670Q9BS34 389 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF577Q9BSK1 485 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 HTATIP2Q9BUP3 242 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 TEKT3Q9BXF9 490 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ITPAQ9BY32 194 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 REXO4Q9GZR2 422 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC22A4Q9H015 551 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GABARAPL1Q9H0R8 117 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RSPH9Q9H1X1 276 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RHOJQ9H4E5 214 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 LDAHQ9H6V9 325 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 APOBEC3GQ9HC16 384 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL1RAPQ9NPH3 570 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CD93Q9NPY3 652 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 IFT46Q9NQC8 304 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CHRAC1Q9NRG0 131 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 SDR39U1Q9NRG7 319 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF277Q9NRM2 450 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 KLHL11Q9NVR0 708 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ING3Q9NXR8 418 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RCOR3Q9P2K3 495 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 WRAP73Q9P2S5 460 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ERVK-18Q9QC07 812 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MBD2Q9UBB5 411 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GABBR1Q9UBS5 961 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 GMEB2Q9UKD1 530 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 MAFFQ9ULX9 164 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 STUB1Q9UNE7 303 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 RUVBL2Q9Y230 463 aaKnown RBP3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ACOT9Q9Y305 439 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 CACNG2Q9Y698 323 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 DOCK5Q9H7D0 1870 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANKRD12Q6UB98 2062 aa3.96□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A087X1B8 175 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 A0A0J9YYE9 177 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZCWPW2A0A1B0GU75 182 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 LINC00854A0A1B0GVQ3 168 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 WDR27A2RRH5 827 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR6C70A6NIJ9 312 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ZNF98A6NK75 572 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 C2CD4BA6NLJ0 364 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PATE3B3GLJ2 98 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 B4DXG7 233 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TISP43B9A030 160 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 KRBOX1C9JBD0 128 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRSS44E7EML9 344 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PTGES3LE9PB15 166 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 NPIPB8E9PQR5 432 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 NEMP1O14524 444 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 INPP4BO15327 924 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PSMD3O43242 534 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 AIREO43918 545 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PLA2G6O60733 806 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SLC43A1O75387 559 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 EEDO75530 441 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 OR5F1O95221 314 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PGLSO95336 258 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANGPTL1O95841 491 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GH2P01242 217 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 IFNA14P01570 189 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 HLA-DQB1P01920 261 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RPLP0P05388 317 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TPOP07202 933 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 RETP07949 1114 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ANXA6P08133 673 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MTHFD1P11586 935 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 IL2RBP14784 551 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CTPS1P17812 591 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATF4P18848 351 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TNNI3P19429 210 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 AGXTP21549 392 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MYL9P24844 172 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 OXTRP30559 389 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 HOXC12P31275 282 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 PRKAR1BP31321 381 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 SOX6P35712 828 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 MASP1P48740 699 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ALDH9A1P49189 494 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GLUD2P49448 558 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 TPMTP51580 245 aa3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 GBX2P52951 348 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P50-201ENST00000605814 ATXN3P54252 364 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms