RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 TMEM200AQ86VY9 491 aa14.36□□□□□ -0.11
FARP1-237ENST00000601853 ACTL9Q8TC94 416 aa14.36□□□□□ -0.11
FARP1-237ENST00000601853 ASB5Q8WWX0 329 aa14.36□□□□□ -0.11
FARP1-237ENST00000601853 KRT35Q92764 455 aa14.36□□□□□ -0.11
FARP1-237ENST00000601853 MMABQ96EY8 250 aaPredicted RBP14.36□□□□□ -0.11
FARP1-237ENST00000601853 ZFYVE21Q9BQ24 234 aa14.36□□□□□ -0.11
FARP1-237ENST00000601853 RPH3AQ9Y2J0 694 aaPredicted RBP14.36□□□□□ -0.11
FARP1-237ENST00000601853 NSD1Q96L73 2696 aaPredicted RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 MROH6A6NGR9 719 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 TOXO94900 526 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 SP1P08047 785 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 HOXD4P09016 255 aaPredicted RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 TPH1P17752 444 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 CTNNA2P26232 953 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 PSMB5P28074 263 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 MSX1P28360 303 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 FOXN2P32314 431 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 FOLH1Q04609 750 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 MEP1AQ16819 746 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 BTBD16Q32M84 506 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 GARNL3Q5VVW2 1013 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 FCRLBQ6BAA4 426 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 TTC23LQ6PF05 361 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 CPEB2Q7Z5Q1 589 aaKnown RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 CNGA4Q8IV77 575 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 CDKL3Q8IVW4 592 aaPredicted RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 ZC3H7AQ8IWR0 971 aaKnown RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 ARHGEF39Q8N4T4 335 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 FAM98AQ8NCA5 519 aaKnown RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 METTL21AQ8WXB1 218 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 RAD51AP1Q96B01 352 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 CYTH2Q99418 400 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 NPAS2Q99743 824 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 CARD6Q9BX69 1037 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 CCM2LQ9NUG4 571 aaPredicted RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 ANKRD10Q9NXR5 420 aa14.35□□□□□ -0.11
FARP1-237ENST00000601853 RUVBL1Q9Y265 456 aaKnown RBP14.35□□□□□ -0.11
FARP1-237ENST00000601853 JMJD1CQ15652 2540 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 A0A1W2PPV9 198 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 OR51F1A6NGY5 319 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 AKR1B15C9JRZ8 316 aaPredicted RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 FOXS1O43638 330 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 SEC24DO94855 1032 aaPredicted RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 CYC1P08574 325 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 ANXA5P08758 320 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 CHRNB4P30926 498 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 FASTKQ14296 549 aaKnown RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 NAA25Q14CX7 972 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 RNFT1Q5M7Z0 435 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 KCTD11Q693B1 232 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 TMEM211Q6ICI0 200 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 SLC25A25Q6KCM7 469 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 C11orf63Q6NUN7 778 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 LRRC8BQ6P9F7 803 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 DARS2Q6PI48 645 aaKnown RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 CRLF3Q8IUI8 442 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 MARVELD2Q8N4S9 558 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 TAB3Q8N5C8 712 aaPredicted RBP14.34□□□□□ -0.11
FARP1-237ENST00000601853 HORMAD2Q8N7B1 307 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 HDAC10Q969S8 669 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 SPATA13Q96N96 652 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 ALS2CR12Q96Q35 445 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 OLFM1Q99784 485 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 FAM118BQ9BPY3 351 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 DPH7Q9BTV6 452 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 KCNK13Q9HB14 408 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 SLC24A3Q9HC58 644 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 KCNJ16Q9NPI9 418 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 TFR2Q9UP52 801 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 HRH3Q9Y5N1 445 aa14.34□□□□□ -0.11
FARP1-237ENST00000601853 IGHV3-20A0A0C4DH32 117 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 CCDC162PA2VCL2 907 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 NKX2-6A6NCS4 301 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 CDK2AP1O14519 115 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 PHF2O75151 1096 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 NEURL1O76050 574 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 SUN1O94901 812 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 APOA4P06727 396 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 RBP3P10745 1247 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 AOAHP28039 575 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 COPS2P61201 443 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 YBX1P67809 324 aaKnown RBP14.33□□□□□ -0.12
FARP1-237ENST00000601853 POU6F1Q14863 301 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 SYT16Q17RD7 645 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 HKDC1Q2TB90 917 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 CSNK1A1LQ8N752 337 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 M1APQ8TC57 530 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 TTC1Q99614 292 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 TSSK1BQ9BXA7 367 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 UCK2Q9BZX2 261 aa14.33□□□□□ -0.12
FARP1-237ENST00000601853 VN1R1Q9GZP7 353 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms