RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 ASF1AQ9Y294 204 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ATG12O94817 140 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 SLC25A14O95258 325 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 HLA-EP13747 358 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TCEA1P23193 301 aaKnown RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 MC4RP32245 332 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 C2orf80Q0P641 193 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ST3GAL4Q11206 333 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 PUM1Q14671 1186 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 KRBOX4Q5JUW0 171 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 RETREG3Q86VR2 466 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ZNF436Q9C0F3 470 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 MAGEA3P43357 314 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 VEGFCP49767 419 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ERVK-8P63133 956 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ESCO2Q56NI9 601 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 HECTD2Q5U5R9 776 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 HSDL2Q6YN16 418 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TMEM209Q96SK2 561 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ALPPP05187 535 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 DNASE1P24855 282 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 SCARF1Q14162 830 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 FAM183BPQ6ZVS7 135 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ZNF101Q8IZC7 436 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ARRDC4Q8NCT1 418 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 APOLD1Q96LR9 279 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TSSK3Q96PN8 268 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 SNRNP25Q9BV90 132 aaKnown RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 MKKSQ9NPJ1 570 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TLL1O43897 1013 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 OAZ2O95190 189 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 MT-ND2P03891 347 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 WDR53Q7Z5U6 358 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 GID4Q8IVV7 300 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 24.7
SHANK2-218ENST00000601538 OR51V1Q9H2C8 321 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TMEM185BQ9H7F4 350 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TUBG2Q9NRH3 451 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TUBAL3A6NHL2 446 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 CLCQ05315 142 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 CERCAMQ5T4B2 595 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
SHANK2-218ENST00000601538 GPAT4Q86UL3 456 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 ALG3Q92685 438 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 DHRS9Q9BPW9 319 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
SHANK2-218ENST00000601538 MN1Q10571 1320 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 MDFIC2A0A1B0GVS7 189 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 TLR4O00206 839 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 MT-CO2P00403 227 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 PAHP00439 452 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 VTNP04004 478 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 DLDP09622 509 aaKnown RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 RPL10P27635 214 aaKnown RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 PRKXP51817 358 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ATP6AP1Q15904 470 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 MEDAGQ5VYS4 303 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ZBTB2Q8N680 514 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 UPF1Q92900 1129 aaKnown RBP eCLIP11.93□□□□□ -0.58e-7■■■■□ 23
SHANK2-218ENST00000601538 LHX5Q9H2C1 402 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ZBTB26Q9HCK0 441 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ENAMQ9NRM1 1142 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 AP2A1O95782 977 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 RBMXP38159 391 aaKnown RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 CLCN3P51790 818 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 OAZ1P54368 228 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 FLI1Q01543 452 aaPredicted RBP11.93□□□□□ -0.5
SHANK2-218ENST00000601538 CD47Q08722 323 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 SPIN4Q56A73 249 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 SLC41A3Q96GZ6 507 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ZIM2Q9NZV7 527 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 PMM2O15305 246 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 NOBOXO60393 691 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 PRAF2O60831 178 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 FCER2P06734 321 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 BMP2P12643 396 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 FNTBP49356 437 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 JAM2P57087 298 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 COX18Q8N8Q8 333 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 FAM46DQ8NEK8 389 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 OR13J1Q8NGT2 312 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 GSKIPQ9P0R6 139 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 CASTOR2A6NHX0 329 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 H3BUI4 141 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 PSMD9O00233 223 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 TREML1Q86YW5 311 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 OR10G2Q8NGC3 310 aa11.93□□□□□ -0.5
SHANK2-218ENST00000601538 NIPAL2Q9H841 368 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms