RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PCDHB3Q9Y5E6 796 aa15.89■□□□□ 0.13
SHKBP1-219ENST00000599575 H7BY64 318 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 TK2O00142 265 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 CLGNO14967 610 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 BRINP1O60477 761 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 UGDHO60701 494 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 H2AFYO75367 372 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 HGFP14210 728 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 CASP2P42575 452 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 HSPA7P48741 367 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 LAPTM5Q13571 262 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 E2F2Q14209 437 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 MAP7Q14244 749 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 KCNAB1Q14722 419 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 TBC1D25Q3MII6 688 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 MANEAQ5SRI9 462 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 ATG9BQ674R7 924 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 NXPE4Q6UWF7 544 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 ADCK2Q7Z695 626 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 MARCH9Q86YJ5 346 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 USP7Q93009 1102 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 NEIL2Q969S2 332 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 WDR34Q96EX3 536 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 MAGEB10Q96LZ2 347 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 PRAP1Q96NZ9 151 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 AIF1LQ9BQI0 150 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 EFCAB11Q9BUY7 163 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 CCDC86Q9H6F5 360 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 ABCF3Q9NUQ8 709 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 SRPK3Q9UPE1 567 aa15.88■□□□□ 0.13
SHKBP1-219ENST00000599575 C9orf172C9J069 976 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 E7EQ34 232 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 CCNT2O60583 730 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 PLIN3O60664 434 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 OR2B3O76000 313 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 SBK3P0C264 359 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 CDH1P12830 882 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 ETV5P41161 510 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 GDF5P43026 501 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 CSNK1G2P78368 415 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 PAGE2BQ5JRK9 111 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 FBXO42Q6P3S6 717 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 HOMEZQ8IX15 550 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 C4orf33Q8N1A6 199 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 ZNF655Q8N720 491 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 PTGR2Q8N8N7 351 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 TTLQ8NG68 377 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 FGF11Q92914 225 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 UBE2E3Q969T4 207 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 RERGQ96A58 199 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 LRFN5Q96NI6 719 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 OR2A5Q96R48 311 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 SELENOSQ9BQE4 189 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 TMEM121BQ9BXQ6 578 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 NLNQ9BYT8 704 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 KLHL25Q9H0H3 589 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 NT5DC2Q9H857 520 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 CUEDC1Q9NWM3 386 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 COPG2Q9UBF2 871 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 STK38LQ9Y2H1 464 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 PLLPQ9Y342 182 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 TMEM184BQ9Y519 407 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 ANGPTL3Q9Y5C1 460 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 B3GALT1Q9Y5Z6 326 aa15.87■□□□□ 0.13
SHKBP1-219ENST00000599575 TRBC2A0A5B9 178 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 FITM1A5D6W6 292 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 A8MT66 165 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 TMEM150CB9EJG8 249 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 STMND1H3BQB6 276 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 CTSVO60911 334 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 PROCP04070 461 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 C1GALT1C1LP0DN25 315 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 MYL2P10916 166 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 SLC5A2P31639 672 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 HPDP32754 393 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 AHRP35869 848 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 PRKAA2P54646 552 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 ARSFP54793 590 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 HERVK_113P63132 956 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 CYP4F3Q08477 520 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 ASPHQ12797 758 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 GRM7Q14831 915 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 GPR19Q15760 415 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 FAM214AQ32MH5 1076 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 C10orf62Q5T681 223 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 SLCO4C1Q6ZQN7 724 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 FAM20CQ8IXL6 584 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 KRT78Q8N1N4 520 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 SNIP1Q8TAD8 396 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 PTCD3Q96EY7 689 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 DPH2Q9BQC3 489 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 ERVK-6Q9BXR3 956 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 SPRY4Q9C004 299 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 KLHL20Q9Y2M5 609 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 AKAP13Q12802 2813 aa15.86■□□□□ 0.13
SHKBP1-219ENST00000599575 H3BMH7 237 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 H3BQF6 201 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 E2F3O00716 465 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 ZSCAN9O15535 394 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 TYROBPO43914 113 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms