RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CNTFP26441 200 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 FOLR3P41439 243 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CLCNKAP51800 687 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 TIAL1Q01085 375 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 IFFO1Q0D2I5 559 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CDSNQ15517 529 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CYP2A13Q16696 494 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MLIPQ5VWP3 458 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 B3GNTL1Q67FW5 361 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 KLHL35Q6PF15 583 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CNPY4Q8N129 248 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 RIBC1Q8N443 379 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 RASGEF1AQ8N9B8 481 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 OR8K5Q8NH50 307 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MZB1Q8WU39 189 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MRRFQ96E11 262 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 VPS39Q96JC1 886 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 IP6K3Q96PC2 410 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 GPR22Q99680 433 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 AARSD1Q9BTE6 412 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 SEMA3GQ9NS98 782 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 PSMC3IPQ9P2W1 217 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CRYL1Q9Y2S2 319 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MED16Q9Y2X0 877 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MTO1Q9Y2Z2 717 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 COMMD10Q9Y6G5 202 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 GPR89AB7ZAQ6 455 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 TMEM150CB9EJG8 249 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 PCDH17O14917 1159 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ATP8B1O43520 1251 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CDK14O94921 469 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 UNC5CO95185 931 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ZBTB11O95625 1053 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 IGHEP01854 428 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 GPR89BP0CG08 455 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 RALBP11234 206 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 PKMP14618 531 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 MSH3P20585 1137 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 FMO4P31512 558 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 TDGF1P3P51864 188 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC9A5Q14940 896 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 BCL7AQ4VC05 210 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 TNFAIP8L3Q5GJ75 292 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 RBM20Q5T481 1227 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 MTFR2Q6P444 385 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CROCCP2Q86T23 111 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 TMEM151BQ8IW70 566 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CYP4X1Q8N118 509 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ACVR1CQ8NER5 493 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 GDAP1Q8TB36 358 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ISL2Q96A47 359 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 MTFMTQ96DP5 389 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 DCUN1D1Q96GG9 259 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ZCCHC2Q9C0B9 1178 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 CTNNAL1Q9UBT7 734 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 IKBKGQ9Y6K9 419 aa13.34□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF469Q96JG9 3925 aaPredicted RBP13.33□□□□□ -0.27
SHKBP1-218ENST00000598907 H3BMM5 538 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 QSOX1O00391 747 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 KLF7O75840 302 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 SNRPAP09012 282 aaKnown RBP13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 AGXTP21549 392 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 IDSP22304 550 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 AKT1P31749 480 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 CA7P43166 264 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 MAGEA12P43365 314 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 PRLHRP49683 370 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 CTSCP53634 463 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 PPP2R2AP63151 447 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 ADORA2A-AS1P86434 159 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 TLR1Q15399 786 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 ZNF658BQ4V348 819 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 CEP85LQ5SZL2 805 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 LGSNQ5TDP6 509 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 HECTD2Q5U5R9 776 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 IRAK1BP1Q5VVH5 260 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 FCRL6Q6DN72 434 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 XKRXQ6PP77 449 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 TMEM207Q6UWW9 146 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 ABRAXAS1Q6UWZ7 409 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 TIFABQ6ZNK6 161 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 PPP1R32Q7Z5V6 425 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 LRRTM4Q86VH4 590 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 ZNF547Q8IVP9 402 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 FAM45AQ8TCE6 357 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 LINC00615Q96LM1 132 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 CD180Q99467 661 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 GPN3Q9UHW5 284 aaPredicted RBP13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 GNPTGQ9UJJ9 305 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 VWA7Q9Y334 891 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms