RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RPF2Q9H7B2 306 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 CD93Q9NPY3 652 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 PHPT1Q9NRX4 125 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 ARMC1Q9NVT9 282 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 AURKCQ9UQB9 309 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 WDR37Q9Y2I8 494 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 TRIOO75962 3097 aa16.44■□□□□ 0.22
SHKBP1-216ENST00000598201 MUC3AQ02505 3323 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3DA0A087WVF3 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3IA0A087WXS9 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3EA0A087X179 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3KA0A087X1G2 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3FA6NER0 549 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3LB9A6J9 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3HP0C7X1 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 MYCLP1P12525 358 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 ACP5P13686 325 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 HSD3B1P14060 373 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 KELP23276 732 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 HSD3B2P26439 372 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 CLCNKAP51800 687 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 PPP2CBP62714 309 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 PPP2CAP67775 309 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 ACSM2AQ08AH3 577 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 ACSM2BQ68CK6 577 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3GQ6DHY5 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3CQ6IPX1 549 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 KIAA1161Q6NSJ0 714 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 IRGCQ6NXR0 463 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 FAM124AQ86V42 546 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 SYT12Q8IV01 421 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 TBC1D3Q8IZP1 549 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 C1orf52Q8N6N3 182 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 SLC5A11Q8WWX8 675 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 C8orf33Q9H7E9 229 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 WNT16Q9UBV4 365 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 PLEKHM1Q9Y4G2 1056 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 PCDHB14Q9Y5E9 798 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 COL4A2P08572 1712 aa16.43■□□□□ 0.22
SHKBP1-216ENST00000598201 PIPSLA2A3N6 862 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CEACAM5P06731 702 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CDKN2CP42773 168 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 UGT8Q16880 541 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 RUNDC3AQ59EK9 446 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 MTX3Q5HYI7 312 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 THEMIS2Q5TEJ8 643 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 IRAK1BP1Q5VVH5 260 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 OR4F3Q6IEY1 312 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 NXPE4Q6UWF7 544 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 HORMAD1Q86X24 394 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 FAM9CQ8IZT9 166 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 DTWD1Q8N5C7 304 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 ICA1LQ8NDH6 482 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 ZNF740Q8NDX6 193 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 OR7A2PQ8NGA2 310 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 OR5K2Q8NHB8 316 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 AURKBQ96GD4 344 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 RUVBL1Q9Y265 456 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 MAN2B2Q9Y2E5 1009 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 PCDHB3Q9Y5E6 796 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 PCM1Q15154 2024 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 GPR89AB7ZAQ6 455 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 SLC31A1O15431 190 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 GSNP06396 782 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 GPR89BP0CG08 455 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 UQCRBP14927 111 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 GLULP15104 373 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 HOXB9P17482 250 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 PTPN6P29350 595 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 KLC1Q07866 573 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CYP4F3Q08477 520 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 BLMHQ13867 455 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CYP51A1Q16850 503 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 TBCELQ5QJ74 424 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 PRAMEF14Q5SWL7 426 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 PRAMEF13Q5VWM6 474 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 LAS2Q8IYD9 372 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 GPR156Q8NFN8 814 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 OR10A6Q8NH74 314 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CHTF18Q8WVB6 975 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 MENTQ9BUN1 341 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 EFCAB11Q9BUY7 163 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 THUMPD3Q9BV44 507 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 ACAT2Q9BWD1 397 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 KCNH6Q9H252 994 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 CA14Q9ULX7 337 aa16.42■□□□□ 0.22
SHKBP1-216ENST00000598201 KANSL1LA0AUZ9 987 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PI15O43692 258 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ERGP11308 486 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 CDH1P12830 882 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PRPS1L1P21108 318 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 ZXDAP98168 799 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 MTAPQ13126 283 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 LRIF1Q5T3J3 769 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 GLYATQ6IB77 296 aa16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 CAPRIN2Q6IMN6 1127 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-216ENST00000598201 PHACTR4Q8IZ21 702 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms