RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ARHGEF39Q8N4T4 335 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 DTWD1Q8N5C7 304 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 METTL27Q8N6F8 245 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 Q8NA96 180 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 STT3BQ8TCJ2 826 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 TM9SF4Q92544 642 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 RERGQ96A58 199 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 MIEF2Q96C03 454 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 SYNPO2LQ9H987 977 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 PARVBQ9HBI1 364 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 CCDC177Q9NQR7 707 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 STOX2Q9P2F5 926 aaPredicted RBP17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 FBXL4Q9UKA2 621 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 PDE10AQ9Y233 779 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 TEX264Q9Y6I9 313 aa17.08■□□□□ 0.32
CHMP2A-203ENST00000597209 KCNE1BA0A087WTH5 132 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 VPS4BO75351 444 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 ZGLP1P0C6A0 271 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 FBLP22087 321 aaKnown RBP17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 CDKN2DP55273 166 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 KLC1Q07866 573 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 RAPSNQ13702 412 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 DSG2Q14126 1118 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 INPP5JQ15735 1006 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 RBBP7Q16576 425 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 TUBB8Q3ZCM7 444 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 THEMIS2Q5TEJ8 643 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 MFRPQ9BY79 579 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 SLAMF7Q9NQ25 335 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 CUEDC1Q9NWM3 386 aaPredicted RBP17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 ADAMTS6Q9UKP5 1117 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 VPS4AQ9UN37 437 aa17.07■□□□□ 0.32
CHMP2A-203ENST00000597209 H7BY64 318 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 NDC80O14777 642 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 HAT1O14929 419 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 CCND1P24385 295 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 SLC26A3P40879 764 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 ITGA8P53708 1063 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 ARL4CP56559 192 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 FAM53BQ14153 422 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 HIF1AQ16665 826 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 HKDC1Q2TB90 917 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 AGTRAPQ6RW13 159 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 SHISA6Q6ZSJ9 500 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 OR11G2Q8NGC1 345 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 THAP11Q96EK4 314 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 SNF8Q96H20 258 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 PRAP1Q96NZ9 151 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 WDR83Q9BRX9 315 aaKnown RBP17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 CRB3Q9BUF7 120 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 TGIF2Q9GZN2 237 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 C14orf105Q9NVL8 296 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 CHMP2BQ9UQN3 213 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 VWA7Q9Y334 891 aa17.06■□□□□ 0.32
CHMP2A-203ENST00000597209 MDC1Q14676 2089 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 A0A1W2PQ72 361 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 MASP2O00187 686 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PCDH17O14917 1159 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 TP73O15350 636 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 TTI1O43156 1089 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FOXS1O43638 330 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 TSPAN12O95859 305 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 HIST1H2ADP20671 130 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FDXRP22570 491 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 ITGA3P26006 1051 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 IL2P60568 153 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 RPS15AP62244 130 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 TBPL1P62380 186 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 NDUFA9Q16795 377 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PLEKHN1Q494U1 663 aaPredicted RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 ATG9BQ674R7 924 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FAM45BPQ6NSW5 357 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 LCTLQ6UWM7 567 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 IGFL2Q6UWQ7 119 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 ADCK2Q7Z695 626 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 ZADH2Q8N4Q0 377 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FAM26EQ8N5C1 309 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FAM45AQ8TCE6 357 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 LINGO1Q96FE5 620 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PDLIM5Q96HC4 596 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 TRIM51Q9BSJ1 452 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 SGPP1Q9BX95 441 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 DRC3Q9H069 523 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 MKKSQ9NPJ1 570 aaPredicted RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 PPANQ9NQ55 473 aaKnown RBP17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 ABCF3Q9NUQ8 709 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 C3orf18Q9UK00 162 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 B3GNT3Q9Y2A9 372 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 FLNCQ14315 2725 aa17.05■□□□□ 0.32
CHMP2A-203ENST00000597209 NBASA2RRP1 2371 aa17.04■□□□□ 0.32
CHMP2A-203ENST00000597209 E7ESA3 106 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms