RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MC1RQ01726 317 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 DLG1Q12959 904 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 CRTC2Q53ET0 693 aaPredicted RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 WASHC2DQ5SRD0 308 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 YOD1Q5VVQ6 348 aaPredicted RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 CCDC91Q7Z6B0 441 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 TBC1D1Q86TI0 1168 aaPredicted RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 TTC9Q92623 222 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 KIAA1191Q96A73 305 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 OR2A5Q96R48 311 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 UBL7Q96S82 380 aaPredicted RBP13.92□□□□□ -0.18
VRK3-206ENST00000594090 CUTCQ9NTM9 273 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 NBEAQ8NFP9 2946 aa13.92□□□□□ -0.18
VRK3-206ENST00000594090 A0A087X1B8 175 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 A0A1B0GX78 115 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 C9J4A7 227 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 POC1B-GALNT4F8VUJ3 575 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 ERVH48-1M5A8F1 160 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 DSCR3O14972 297 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 CREG1O75629 220 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 MED26O95402 600 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 ALDOAP04075 364 aaKnown RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 C2P06681 752 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 LTA4HP09960 611 aaKnown RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 RAB40ALP0C0E4 278 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 CDH1P12830 882 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 TNFRSF8P28908 595 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 SLC26A3P40879 764 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 SERPINB8P50452 374 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 SERPINB9P50453 376 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 NCF4Q15080 339 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 TAF1BQ53T94 588 aaPredicted RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 TTLL10Q6ZVT0 673 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 GPSM1Q86YR5 675 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 PLD3Q8IV08 490 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 DCAKDQ8WVC6 231 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 RERGQ96A58 199 aaPredicted RBP13.91□□□□□ -0.18
VRK3-206ENST00000594090 RHBDF1Q96CC6 855 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 C17orf62Q9BQA9 187 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 NLNQ9BYT8 704 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 FAM117AQ9C073 453 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 IGSF5Q9NSI5 407 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 ZNF180Q9UJW8 692 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 MGAQ8IWI9 3026 aa13.91□□□□□ -0.18
VRK3-206ENST00000594090 EXOC1LA0A1B0GW35 172 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 HYKKA2RU49 373 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NCF1BA6NI72 391 aaPredicted RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 NCF1CA8MVU1 366 aaPredicted RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 ITGB2P05107 769 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NCF1P14598 390 aaPredicted RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 TFEBP19484 476 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ITGAXP20702 1163 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ALAS2P22557 587 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 MSH2P43246 934 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 SLC6A12P48065 614 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 RPS15AP62244 130 aaKnown RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 NFKB2Q00653 900 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 IRF9Q00978 393 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ERV3-1Q14264 604 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 PRTGQ2VWP7 1150 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 FAM214AQ32MH5 1076 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NKAIN1Q4KMZ8 207 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ATP1A1-AS1Q5TC04 95 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 SYVN1Q86TM6 617 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 THOC6Q86W42 341 aaKnown RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 CENPLQ8N0S6 344 aaPredicted RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 TCAIMQ8N3R3 496 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 CSNK1A1LQ8N752 337 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ABHD11Q8NFV4 315 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 KCTD4Q8WVF5 259 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NEIL2Q969S2 332 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ISL2Q96A47 359 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 C10orf90Q96M02 699 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 CATSPER2Q96P56 530 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 ALG9Q9H6U8 611 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NMRAL1Q9HBL8 299 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 NDOR1Q9UHB4 597 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 TLK1Q9UKI8 766 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 RUVBL1Q9Y265 456 aaKnown RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 FARSAQ9Y285 508 aaKnown RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
VRK3-206ENST00000594090 MDC1Q14676 2089 aaKnown RBP13.9□□□□□ -0.18
VRK3-206ENST00000594090 A0A096LPK6 155 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 P2RX6O15547 441 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 KERAO60938 352 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 WDR47O94967 919 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 RECKO95980 971 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 FURINP09958 794 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.19
VRK3-206ENST00000594090 CNTFP26441 200 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms