RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 CDC23Q9UJX2 597 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 CDC14AQ9UNH5 594 aa14.57□□□□□ -0.08
TRIM28-203ENST00000593582 AGPSO00116 658 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 MED26O95402 600 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 TSPAN12O95859 305 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 MMP11P24347 488 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 CCND1P24385 295 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 OCA2Q04671 838 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 AGTRAPQ6RW13 159 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 SYT10Q6XYQ8 523 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 MBOAT1Q6ZNC8 495 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 SHISA6Q6ZSJ9 500 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 STRA8Q7Z7C7 330 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 SLC26A11Q86WA9 606 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 HPS6Q86YV9 775 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 DTWD1Q8N5C7 304 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 PYROXD1Q8WU10 500 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 MVB12AQ96EY5 273 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 C10orf90Q96M02 699 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 SPSB2Q99619 263 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 OLFM1Q99784 485 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 NUDT9Q9BW91 350 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 TRIM54Q9BYV2 358 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 DPH5Q9H2P9 285 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 SOX17Q9H6I2 414 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-203ENST00000593582 TMEM184CQ9NVA4 438 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 CUEDC1Q9NWM3 386 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-203ENST00000593582 ARL15Q9NXU5 204 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 NSMCE4AQ9NXX6 385 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 MOCS1Q9NZB8 636 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 ZNF282Q9UDV7 671 aaPredicted RBP14.56□□□□□ -0.08
TRIM28-203ENST00000593582 RUVBL1Q9Y265 456 aaKnown RBP14.56□□□□□ -0.08
TRIM28-203ENST00000593582 UTP11Q9Y3A2 253 aaKnown RBP14.56□□□□□ -0.08
TRIM28-203ENST00000593582 FER1L5A0AVI2 2057 aa14.56□□□□□ -0.08
TRIM28-203ENST00000593582 HAT1O14929 419 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.081e-9■■■□□ 18.4
TRIM28-203ENST00000593582 RAD51CO43502 376 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 KLHL41O60662 606 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 DPM1O60762 260 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 ALPPP05187 535 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 SAT1P21673 171 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 FBLP22087 321 aaKnown RBP14.55□□□□□ -0.08
TRIM28-203ENST00000593582 AP1S2P56377 157 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 CBLBQ13191 982 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 NAE1Q13564 534 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 RAPSNQ13702 412 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 PHKG1Q16816 387 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 HKDC1Q2TB90 917 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 ZC3HC1Q86WB0 502 aaKnown RBP14.55□□□□□ -0.08
TRIM28-203ENST00000593582 C17orf64Q86WR6 236 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 GALNT16Q8N428 558 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
TRIM28-203ENST00000593582 VPS50Q96JG6 964 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 ATG10Q9H0Y0 220 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 SEMA3GQ9NS98 782 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 PSAT1Q9Y617 370 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 RELNP78509 3460 aa14.55□□□□□ -0.08
TRIM28-203ENST00000593582 VSTM2BA6NLU5 285 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 EIF3HO15372 352 aaKnown RBP eCLIP14.54□□□□□ -0.082e-12■■□□□ 11.9
TRIM28-203ENST00000593582 ANXA5P08758 320 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 ENO2P09104 434 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 ZGLP1P0C6A0 271 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 PGGT1BP53609 377 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 RPS15AP62244 130 aaKnown RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 FOXK1P85037 733 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 ILF2Q12905 390 aaKnown RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 AIMP2Q13155 320 aaKnown RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 DSG2Q14126 1118 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 NDUFA9Q16795 377 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 VWA5B1Q5TIE3 1220 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 CAPN13Q6MZZ7 669 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 CAPN12Q6ZSI9 719 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 PLD3Q8IV08 490 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 TMEM151BQ8IW70 566 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 STT3BQ8TCJ2 826 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 ATL1Q8WXF7 558 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 MIEF2Q96C03 454 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 MMABQ96EY8 250 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 PDLIM5Q96HC4 596 aaKnown RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 VPS39Q96JC1 886 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 SMAD5Q99717 465 aaKnown RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 CRB3Q9BUF7 120 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 YIPF2Q9BWQ6 316 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 SGPP1Q9BX95 441 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 DRC3Q9H069 523 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 SYNPO2LQ9H987 977 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 SAYSD1Q9NPB0 183 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 ATP13A2Q9NQ11 1180 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 FBXL4Q9UKA2 621 aa14.54□□□□□ -0.08
TRIM28-203ENST00000593582 UBR5O95071 2799 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-203ENST00000593582 MYO18BQ8IUG5 2567 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 KCNE1BA0A087WTH5 132 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 FAM95CA0A1B0GW59 222 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 TTLL8A6PVC2 850 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 SOCS6O14544 535 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 ZNF37AP17032 561 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-203ENST00000593582 GRK3P35626 688 aa14.53□□□□□ -0.08
TRIM28-203ENST00000593582 MLLT10P55197 1068 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms