RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 MKKSQ9NPJ1 570 aaPredicted RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 FBXO6Q9NRD1 293 aaPredicted RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 RUVBL1Q9Y265 456 aaKnown RBP12.64□□□□□ -0.39
APOC1-209ENST00000592885 SLC5A6Q9Y289 635 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 DHRS7Q9Y394 339 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 NEU2Q9Y3R4 380 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 DOPEY1Q5JWR5 2465 aa12.64□□□□□ -0.39
APOC1-209ENST00000592885 GOLGA6L10A0A0M3HER8 536 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 WIPF3A6NGB9 483 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 KIF5CO60282 957 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 ALOX12BO75342 701 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 CXCR2P25025 360 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 SLC26A3P40879 764 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 GLRBP48167 497 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 TERF1P54274 439 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 YBX1P67809 324 aaKnown RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 SP140Q13342 867 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 CTBP1Q13363 440 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 TSTA3Q13630 321 aaPredicted RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 PTK6Q13882 451 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 FAM53BQ14153 422 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 INAQ16352 499 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 HIF1AQ16665 826 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 NDUFA9Q16795 377 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 C4orf17Q53FE4 359 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 RPUSD3Q6P087 351 aaKnown RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 RIPOR1Q6ZS17 1223 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 NDUFAF7Q7L592 441 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 DENND6AQ8IWF6 608 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 PARP9Q8IXQ6 854 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 PPIL6Q8IXY8 311 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 LRRC56Q8IYG6 542 aaPredicted RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 ARHGEF39Q8N4T4 335 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
APOC1-209ENST00000592885 DNAJB14Q8TBM8 379 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 SLC30A3Q99726 388 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 TRIM56Q9BRZ2 755 aaKnown RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 DRC3Q9H069 523 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 PCBD2Q9H0N5 130 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 ZNF160Q9HCG1 818 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 C20orf96Q9NUD7 363 aaPredicted RBP12.63□□□□□ -0.39
APOC1-209ENST00000592885 RIC8BQ9NVN3 520 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 TRPC4Q9UBN4 977 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 PCYOX1Q9UHG3 505 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
APOC1-209ENST00000592885 CPAMD8Q8IZJ3 1885 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 NSG1A0A0A6YYJ2 146 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 IDSB3KWA1 339 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 GOLGA8MH3BSY2 632 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 CES2O00748 559 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 SYF2O95926 243 aaKnown RBP12.62□□□□□ -0.39
APOC1-209ENST00000592885 LDLRP01130 860 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 COX6A1P12074 109 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 PGAM1P18669 254 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 IMPA1P29218 277 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 Q0VFX4 171 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 CUL1Q13616 776 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 HKDC1Q2TB90 917 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 VWA2Q5GFL6 755 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 THEMIS2Q5TEJ8 643 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 ZNF549Q6P9A3 640 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 CYHR1Q6ZMK1 362 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 KCNMB4Q86W47 210 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 AMER3Q8N944 861 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 ACTRT1Q8TDG2 376 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 MMABQ96EY8 250 aaPredicted RBP12.62□□□□□ -0.39
APOC1-209ENST00000592885 SIGLEC10Q96LC7 697 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 C5orf34Q96MH7 638 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 GPR21Q99679 349 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 AARSD1Q9BTE6 412 aaKnown RBP12.62□□□□□ -0.39
APOC1-209ENST00000592885 FAM129AQ9BZQ8 928 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
APOC1-209ENST00000592885 TMEM184CQ9NVA4 438 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
APOC1-209ENST00000592885 FBXO5Q9UKT4 447 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 NTNG1Q9Y2I2 539 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 CSAG2Q9Y5P2 127 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 NBPF19A0A087WUL8 3843 aa12.62□□□□□ -0.39
APOC1-209ENST00000592885 KCNE1BA0A087WTH5 132 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 LOC102723996A0A087X1L8 192 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 IGHV1-45A0A0A0MS14 117 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 H0YIG0 161 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 HAT1O14929 419 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 BMP10O95393 424 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 TTC4O95801 387 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 SERPINA7P05543 415 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 C8GP07360 202 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 HEXBP07686 556 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 RNF224P0DH78 156 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 EDN3P14138 238 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 CCND1P24385 295 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 SOX11P35716 441 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 AVPR1BP47901 424 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 RGS4P49798 205 aa12.61□□□□□ -0.39
APOC1-209ENST00000592885 EMP2P54851 167 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms