RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TEFMQ96QE5 360 aaKnown RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 ZPBPQ9BS86 351 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 CD244Q9BZW8 370 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 SPRTNQ9H040 489 aaPredicted RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 CNOT10Q9H9A5 744 aaKnown RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 FANCEQ9HB96 536 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 TMEM184CQ9NVA4 438 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 SERTAD3Q9UJW9 196 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ACSL6Q9UKU0 697 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 DYRK1BQ9Y463 629 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 E7EQ34 232 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 CCNT2O60583 730 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 PRAMEF4O60810 478 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 GLRA3O75311 464 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SCRG1O75711 98 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 OR2B3O76000 313 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 STK17BO94768 372 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SIX3O95343 332 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 GFAPP14136 432 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 EZRP15311 586 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 CCR8P51685 355 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 ITGA1P56199 1179 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 VSX2P58304 361 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 CDC16Q13042 620 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 ACACAQ13085 2346 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 CASP8Q14790 479 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 PDK4Q16654 411 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 CEP85LQ5SZL2 805 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 PRAMEF9Q5VWM5 478 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 NXPE4Q6UWF7 544 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SLCO4C1Q6ZQN7 724 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 LRRC70Q7Z2Q7 622 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 ADCK2Q7Z695 626 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SRRM1Q8IYB3 904 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 PTGR2Q8N8N7 351 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 SNIP1Q8TAD8 396 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 N4BP2L2Q92802 583 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 FGF11Q92914 225 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 OR2A5Q96R48 311 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 ZFYVE21Q9BQ24 234 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SELENOSQ9BQE4 189 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 ULBP3Q9BZM4 244 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 SPNS1Q9H2V7 528 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 C12orf65Q9H3J6 166 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 ENAMQ9NRM1 1142 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 STARD5Q9NSY2 213 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 DNAJC11Q9NVH1 559 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 TMCO1Q9UM00 188 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 TMEM184BQ9Y519 407 aaPredicted RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 KCNE2Q9Y6J6 123 aa9.52□□□□□ -0.89
TPM4-216ENST00000592822 TPRP12270 2363 aaKnown RBP9.52□□□□□ -0.89
TPM4-216ENST00000592822 KCNE1BA0A087WTH5 132 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TEX51A0A1B0GUA7 166 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 FEZF1A0PJY2 475 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 A8MT66 165 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 H0YGG7 62 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 STX16-NPEPL1H3BU86 382 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 K7EPI3 171 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TAF4O00268 1085 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 COPEO14579 308 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 STX16O14662 325 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 RGS16O15492 202 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 ZNF749O43361 778 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 LCMT2O60294 686 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 SRPX2O60687 465 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 SMIM24O75264 130 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 KIAA0754O94854 1291 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 DLGAP3O95886 979 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 PROCP04070 461 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 NTRK1P04629 796 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 CREB1P16220 341 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 GNAZP19086 355 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 VARSP26640 1264 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 CD82P27701 267 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 BCL6P41182 706 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 GCGRP47871 477 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 CCT5P48643 541 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 PCBP4P57723 403 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 ARF3P61204 181 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 MEF2AQ02078 507 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 PCBP2Q15366 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
TPM4-216ENST00000592822 TGIF1Q15583 401 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TNFAIP8L3Q5GJ75 292 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 WASHC2DQ5SRD0 308 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 ATG9BQ674R7 924 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TIPARPQ7Z3E1 657 aaKnown RBP9.51□□□□□ -0.89
TPM4-216ENST00000592822 TMPRSS11BQ86T26 416 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 DTX1Q86Y01 620 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TMEM126BQ8IUX1 230 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 GPR135Q8IZ08 494 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 TEX9Q8N6V9 391 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 BANPQ8N9N5 519 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 SNX31Q8N9S9 440 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 SLC38A9Q8NBW4 561 aa9.51□□□□□ -0.89
TPM4-216ENST00000592822 ZNF740Q8NDX6 193 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms