RNA–Protein interactions for RNA: ENST00000592097.5

NEDD4L-234, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-234ENST00000592097 CTAG2O75638 210 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 ZRANB2O95218 330 aaKnown RBP eCLIP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 RAF1P04049 648 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 HOXD4P09016 255 aaPredicted RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 CBSLP0DN79 551 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 MYBL2P10244 700 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 ZNF7P17097 686 aaPredicted RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 HLA-DPA1P20036 260 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 CHRNB4P30926 498 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 CBSP35520 551 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PTPN9P43378 593 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 LGALS4P56470 323 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 NRG3P56975 720 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 DCDP81605 110 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 SRSF2Q01130 221 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PMP22Q01453 160 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 IL10RBQ08334 325 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PRKAA1Q13131 559 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 RBBP7Q16576 425 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 MUM1Q2TAK8 710 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 RAB6CQ53S08 254 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 C1orf189Q5VU69 101 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 RHBDD2Q6NTF9 364 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 SLFN11Q7Z7L1 901 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 CLYBLQ8N0X4 340 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 BBS5Q8N3I7 341 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 FAM172AQ8WUF8 416 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 ZFPM2Q8WW38 1151 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 N4BP2L2Q92802 583 aaPredicted RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 NSMCE3Q96MG7 304 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 KCNC2Q96PR1 638 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 DMRTA2Q96SC8 542 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 MGME1Q9BQP7 344 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 GPATCH1Q9BRR8 931 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 RAB6CQ9H0N0 254 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 QRSL1Q9H0R6 528 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 WDR54Q9H977 334 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 FAM207AQ9NSI2 230 aaPredicted RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 IMP3Q9NV31 184 aaKnown RBP6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PKD2L2Q9NZM6 624 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 PCDHA7Q9UN72 937 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 HS3ST3B1Q9Y662 390 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 GTF3C1Q12789 2109 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 TLN2Q9Y4G6 2542 aa6.68□□□□□ -1.34
NEDD4L-234ENST00000592097 SNRNP200O75643 2136 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 A0A0J9YYE9 177 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 NKX2-6A6NCS4 301 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 FAM227AF5H4B4 570 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 DFFAO00273 331 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PRRG2O14669 202 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 CHUKO15111 745 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 ZSCAN9O15535 394 aaPredicted RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 LSM8O95777 96 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TRBC1P01850 177 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 MTHFD1P11586 935 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 LMAN1P49257 510 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 EPHB1P54762 984 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 AIF1P55008 147 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 FOXL2P58012 376 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 XRCC4Q13426 336 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 NFYCQ13952 458 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PTPRRQ15256 657 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 NKAIN1Q4KMZ8 207 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 COBLL1Q53SF7 1204 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TOR2AQ5JU69 321 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PGM2L1Q6PCE3 622 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 FBXO38Q6PIJ6 1188 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TRIM65Q6PJ69 517 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 LCNL1Q6ZST4 164 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TRAPPC5Q8IUR0 188 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 GLB1L2Q8IW92 636 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PYROXD2Q8N2H3 581 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 CPSF7Q8N684 471 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 MYRIPQ8NFW9 859 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 GOT1L1Q8NHS2 421 aaPredicted RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 CCDC110Q8TBZ0 833 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TSPEARQ8WU66 669 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TMEM158Q8WZ71 300 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 ZNF599Q96NL3 588 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 OR10A2Q9H208 303 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 LIME1Q9H400 295 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 NOD2Q9HC29 1040 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 ARFGAP3Q9NP61 516 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 RMND1Q9NWS8 449 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 MKS1Q9NXB0 559 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PTGFRNQ9P2B2 879 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 TRIM10Q9UDY6 481 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 SLC23A2Q9UGH3 650 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 NXT1Q9UKK6 140 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 ZDHHC9Q9Y397 364 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 MRPS2Q9Y399 296 aaKnown RBP6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 PPIL1Q9Y3C6 166 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 GPR45Q9Y5Y3 372 aa6.67□□□□□ -1.34
NEDD4L-234ENST00000592097 C1orf232A0A0U1RR37 186 aa6.66□□□□□ -1.34
NEDD4L-234ENST00000592097 FAM170AA1A519 330 aa6.66□□□□□ -1.34
NEDD4L-234ENST00000592097 OR6C74A6NCV1 312 aa6.66□□□□□ -1.34
NEDD4L-234ENST00000592097 OR5H15A6NDH6 313 aa6.66□□□□□ -1.34
NEDD4L-234ENST00000592097 C2CD4BA6NLJ0 364 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms