RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 C8orf74Q6P047 294 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 SBSNQ6UWP8 590 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 C3orf62Q6ZUJ4 267 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ADCK2Q7Z695 626 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 DTWD1Q8N5C7 304 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 CSNK1A1LQ8N752 337 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ANKRD7Q92527 254 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 CDKL2Q92772 493 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 PTERQ96BW5 349 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 IP6K3Q96PC2 410 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 TRIM54Q9BYV2 358 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 TMEM184CQ9NVA4 438 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ARL15Q9NXU5 204 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 IKZF3Q9UKT9 509 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ANKRD12Q6UB98 2062 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 FAM159BA6NKW6 160 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 H7BY64 318 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 SLC28A2O43868 658 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 UMODP07911 640 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 OTX2P32243 289 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 FOXL2P58012 376 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 SLC7A5Q01650 507 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 NAE1Q13564 534 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 ZNF460Q14592 562 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 MUM1Q2TAK8 710 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 PRMT9Q6P2P2 845 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 MED25Q71SY5 747 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 PRICKLE2Q7Z3G6 844 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 MRGPREQ86SM8 312 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 PTRH1Q86Y79 214 aaKnown RBP25.98■■□□□ 1.75
SMAD4-213ENST00000591914 CEP97Q8IW35 865 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 TMEM151BQ8IW70 566 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 NKAPQ8N5F7 415 aaKnown RBP25.98■■□□□ 1.75
SMAD4-213ENST00000591914 TMEM102Q8N9M5 508 aaPredicted RBP25.98■■□□□ 1.75
SMAD4-213ENST00000591914 PRAP1Q96NZ9 151 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 LRRC1Q9BTT6 524 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 POPDC3Q9HBV1 291 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 ACSS2Q9NR19 701 aa25.98■■□□□ 1.75
SMAD4-213ENST00000591914 NOVA2Q9UNW9 492 aaKnown RBP25.98■■□□□ 1.75
SMAD4-213ENST00000591914 MED13Q9UHV7 2174 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 K7EM74 188 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 OR1D4P47884 311 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 NKG7Q16617 165 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 PPP1R3AQ16821 1122 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 CCDC25Q86WR0 208 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 ARHGEF39Q8N4T4 335 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 METTL27Q8N6F8 245 aaPredicted RBP25.97■■□□□ 1.75
SMAD4-213ENST00000591914 RERGQ96A58 199 aaPredicted RBP25.97■■□□□ 1.75
SMAD4-213ENST00000591914 FBXL8Q96CD0 374 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 CPNE1Q99829 537 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 SH2B3Q9UQQ2 575 aa25.97■■□□□ 1.75
SMAD4-213ENST00000591914 RUVBL1Q9Y265 456 aaKnown RBP25.97■■□□□ 1.75
SMAD4-213ENST00000591914 ESYT3A0FGR9 886 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 PABPN1LA6NDY0 278 aaKnown RBP25.96■■□□□ 1.75
SMAD4-213ENST00000591914 CEACAM4O75871 244 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 NPPBP16860 134 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 MAGEA4P43358 317 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 POU4F1Q01851 419 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 HKDC1Q2TB90 917 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 CAPN13Q6MZZ7 669 aaPredicted RBP25.96■■□□□ 1.75
SMAD4-213ENST00000591914 LCTLQ6UWM7 567 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 C17orf64Q86WR6 236 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 PLD3Q8IV08 490 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 OR56A3Q8NH54 315 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 ATL1Q8WXF7 558 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 ZNF592Q92610 1267 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 CABS1Q96KC9 395 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 SPSB2Q99619 263 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 LRRC4CQ9HCJ2 640 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 ZNF304Q9HCX3 659 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 MLXIPLQ9NP71 852 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 ZDHHC18Q9NUE0 388 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 TXNDC16Q9P2K2 825 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 CTSFQ9UBX1 484 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 NXT1Q9UKK6 140 aaKnown RBP25.96■■□□□ 1.75
SMAD4-213ENST00000591914 MTO1Q9Y2Z2 717 aaKnown RBP25.96■■□□□ 1.75
SMAD4-213ENST00000591914 PCDHGA9Q9Y5G4 932 aaKnown RBP25.96■■□□□ 1.75
SMAD4-213ENST00000591914 MAU2Q9Y6X3 613 aa25.96■■□□□ 1.75
SMAD4-213ENST00000591914 KCNE1BA0A087WTH5 132 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 TXNDC9O14530 226 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 WISP3O95389 354 aaPredicted RBP25.95■■□□□ 1.74
SMAD4-213ENST00000591914 NR1D1P20393 614 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 CCL11P51671 97 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 RRADP55042 308 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 CSNK1G2P78368 415 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 GARNL3Q5VVW2 1013 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 ATG14Q6ZNE5 492 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 PPP1R32Q7Z5V6 425 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 ANKRD49Q8WVL7 239 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 NACC2Q96BF6 587 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 MVB12AQ96EY5 273 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 RBBP8Q99708 897 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 HAUS8Q9BT25 410 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 GPAMQ9HCL2 828 aa25.95■■□□□ 1.74
SMAD4-213ENST00000591914 VSTM2BA6NLU5 285 aa25.94■■□□□ 1.74
SMAD4-213ENST00000591914 CDC7O00311 574 aa25.94■■□□□ 1.74
SMAD4-213ENST00000591914 P2RX6O15547 441 aa25.94■■□□□ 1.74
SMAD4-213ENST00000591914 TUBB4AP04350 444 aa25.94■■□□□ 1.74
SMAD4-213ENST00000591914 GP5P40197 560 aa25.94■■□□□ 1.74
SMAD4-213ENST00000591914 RPS15AP62244 130 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms