RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 NADK2Q4G0N4 442 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 MROH9Q5TGP6 573 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 FAM69BQ5VUD6 431 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 RHBDD2Q6NTF9 364 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 TRIM73Q86UV7 250 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 RAB43Q86YS6 212 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 HPS6Q86YV9 775 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 DCUN1D3Q8IWE4 304 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 MYO1HQ8N1T3 1032 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 N4BP2L2Q92802 583 aaPredicted RBP17.24■□□□□ 0.35
VAT1-208ENST00000590924 ISL2Q96A47 359 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 RAD51AP1Q96B01 352 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 C17orf62Q9BQA9 187 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 G3BP2Q9UN86 482 aaKnown RBP17.24■□□□□ 0.35
VAT1-208ENST00000590924 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
VAT1-208ENST00000590924 ZBTB14O43829 449 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 OR2B3O76000 313 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 CATP04040 527 aaKnown RBP17.23■□□□□ 0.35
VAT1-208ENST00000590924 C8GP07360 202 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 TPBGLP0DKB5 382 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 SP140Q13342 867 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 ZIC1Q15915 447 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 TMEM207Q6UWW9 146 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 TIFABQ6ZNK6 161 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 EFCAB3Q8N7B9 438 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 GALNT11Q8NCW6 608 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 FDCSPQ8NFU4 85 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 CFAP61Q8NHU2 1237 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 CPT1CQ8TCG5 803 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 LINGO1Q96FE5 620 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 UBXN10Q96LJ8 280 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 ROPN1BQ9BZX4 212 aaPredicted RBP17.23■□□□□ 0.35
VAT1-208ENST00000590924 CAB39LQ9H9S4 337 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 ROPN1Q9HAT0 212 aaPredicted RBP17.23■□□□□ 0.35
VAT1-208ENST00000590924 SPHK1Q9NYA1 384 aa17.23■□□□□ 0.35
VAT1-208ENST00000590924 PSMC3IPQ9P2W1 217 aaPredicted RBP17.23■□□□□ 0.35
VAT1-208ENST00000590924 TDRKHQ9Y2W6 561 aaKnown RBP17.23■□□□□ 0.35
VAT1-208ENST00000590924 IQANK1A0A1B0GTG1 560 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 CCDC189A1A4V9 331 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 HCRTR1O43613 425 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 DPM1O60762 260 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 VPS4BO75351 444 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 KLF7O75840 302 aaPredicted RBP17.22■□□□□ 0.35
VAT1-208ENST00000590924 GP1BBP13224 206 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 TYK2P29597 1187 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 SERPINB8P50452 374 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 ATP1A4Q13733 1029 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 DEFB110Q30KQ9 67 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 PROKR1Q8TCW9 393 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 IP6K3Q96PC2 410 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 NUDT9Q9BW91 350 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 DERL2Q9GZP9 239 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 GPR83Q9NYM4 423 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 VPS4AQ9UN37 437 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 NOVA2Q9UNW9 492 aaKnown RBP17.22■□□□□ 0.35
VAT1-208ENST00000590924 SRPK3Q9UPE1 567 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 ACOT9Q9Y305 439 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 NFS1Q9Y697 457 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 CNTRLQ7Z7A1 2325 aa17.22■□□□□ 0.35
VAT1-208ENST00000590924 A0A087X1B8 175 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 ZSCAN9O15535 394 aaPredicted RBP17.21■□□□□ 0.35
VAT1-208ENST00000590924 SHBGP04278 402 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 PEBP1P30086 187 aaKnown RBP17.21■□□□□ 0.35
VAT1-208ENST00000590924 HSD17B2P37059 387 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 MAGEA12P43365 314 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 ATP6V0D1P61421 351 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 BMPR2Q13873 1038 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 UBE2R2Q712K3 238 aaPredicted RBP17.21■□□□□ 0.35
VAT1-208ENST00000590924 PIWIL4Q7Z3Z4 852 aaKnown RBP17.21■□□□□ 0.35
VAT1-208ENST00000590924 RAB42Q8N4Z0 105 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 MCOLN3Q8TDD5 553 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 GBP5Q96PP8 586 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 PSMG3-AS1Q96PY0 264 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 SMAD5Q99717 465 aaKnown RBP17.21■□□□□ 0.35
VAT1-208ENST00000590924 TMEM109Q9BVC6 243 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 RAB11FIP5Q9BXF6 653 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 PARVBQ9HBI1 364 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 SNX15Q9NRS6 342 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 MAP4K5Q9Y4K4 846 aa17.21■□□□□ 0.35
VAT1-208ENST00000590924 PRRC2CQ9Y520 2896 aaKnown RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 TRIM49D1C9J1S8 452 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 MYO1CO00159 1063 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 PHGDHO43175 533 aaKnown RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 CDH16O75309 829 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ALDOAP04075 364 aaKnown RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 C2P06681 752 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 CD63P08962 238 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ENO2P09104 434 aaPredicted RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 SLC35E2BP0CK96 405 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 CCDC166P0CW27 439 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 COL6A2P12110 1019 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 PKLRP30613 574 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 UQCRFS1P47985 274 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 GRB7Q14451 532 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ZNF460Q14592 562 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 SSPNQ14714 243 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ARHGAP19Q14CB8 494 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms