RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PGGT1BP53609 377 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 PNLIPRP1P54315 467 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 RPS18P62269 152 aaKnown RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 TAP2Q03519 686 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 CKAP4Q07065 602 aaKnown RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SP140Q13342 867 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 TRADDQ15628 312 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 PTCHD3Q3KNS1 767 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 HECTD2Q5U5R9 776 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 TLDC1Q6P9B6 456 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 RNF44Q7L0R7 432 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 BTLAQ7Z6A9 289 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SLC26A11Q86WA9 606 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 ZC3HC1Q86WB0 502 aaKnown RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 MCATQ8IVS2 390 aaKnown RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 GPR135Q8IZ08 494 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 FBXO25Q8TCJ0 367 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 PROKR1Q8TCW9 393 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 EEF1AKMT1Q8WVE0 214 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SEC14L1Q92503 715 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 OLFM1Q99784 485 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 DPH2Q9BQC3 489 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SLC6A20Q9NP91 592 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SAYSD1Q9NPB0 183 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 PPANQ9NQ55 473 aaKnown RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-211ENST00000590499 ZFATQ9P243 1243 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 ADAMTS6Q9UKP5 1117 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 VWA7Q9Y334 891 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 BAHCC1Q9P281 2608 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 PCSK5Q92824 1860 aa10.74□□□□□ -0.69
SMAD4-211ENST00000590499 FITM1A5D6W6 292 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ZBTB14O43829 449 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 C8GP07360 202 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 IMPA1P29218 277 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 SSTR1P30872 391 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 RGS4P49798 205 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 POLE2P56282 527 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 NFKB2Q00653 900 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 IL10RAQ13651 578 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ERV3-1Q14264 604 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 NCF4Q15080 339 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 UGT8Q16880 541 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 WHAMMP3Q1A5X7 153 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ZC3H12BQ5HYM0 836 aaKnown RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF425Q6IV72 752 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 FAM45BPQ6NSW5 357 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 C16orf46Q6P387 395 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 SUSD1Q6UWL2 747 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 TMEM207Q6UWW9 146 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 UBE2R2Q712K3 238 aaPredicted RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 SYVN1Q86TM6 617 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 PAQR7Q86WK9 346 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF655Q8N720 491 aaPredicted RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ENDOVQ8N8Q3 282 aaKnown RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 GPATCH11Q8N954 259 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 PPFIBP2Q8ND30 876 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 FAM45AQ8TCE6 357 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ADAMTS17Q8TE56 1095 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 PYROXD1Q8WU10 500 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 LINGO1Q96FE5 620 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 DPH7Q9BTV6 452 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 NLNQ9BYT8 704 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 RAB17Q9H0T7 212 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ADNPQ9H2P0 1102 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 SYNPO2LQ9H987 977 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 GEMIN8Q9NWZ8 242 aaKnown RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 ANKMY1Q9P2S6 941 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 SRPK3Q9UPE1 567 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 PDE10AQ9Y233 779 aa10.73□□□□□ -0.69
SMAD4-211ENST00000590499 FARSAQ9Y285 508 aaKnown RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 UTP11Q9Y3A2 253 aaKnown RBP10.73□□□□□ -0.69
SMAD4-211ENST00000590499 TCRBV9S1A1TA0A576 114 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 EIF4E1BA6NMX2 242 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ZNF839A8K0R7 811 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 SLC16A5O15375 505 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 URI1O94763 535 aaPredicted RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ONECUT2O95948 504 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ITGAXP20702 1163 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 CMPK1P30085 196 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 RPA3P35244 121 aaPredicted RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 CCR10P46092 362 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PLTPP55058 493 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 GPX6P59796 221 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 IL2P60568 153 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 RPS15P62841 145 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 CAV1Q03135 178 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PRDX1Q06830 199 aaKnown RBP10.72□□□□□ -0.69
SMAD4-211ENST00000590499 NAA25Q14CX7 972 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 PHKG1Q16816 387 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 DEFB109BQ30KR1 87 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 ICE2Q659A1 982 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 FRMPD2BQ6IN97 320 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 FBXO42Q6P3S6 717 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 MBOAT1Q6ZNC8 495 aa10.72□□□□□ -0.69
SMAD4-211ENST00000590499 CAPN12Q6ZSI9 719 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms