RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 LINC00696Q6ZRV3 163 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 PIWIL4Q7Z3Z4 852 aaKnown RBP17.13■□□□□ 0.33
H3F3B-209ENST00000589949 NAT8LQ8N9F0 302 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 FBXO15Q8NCQ5 510 aaPredicted RBP17.13■□□□□ 0.33
H3F3B-209ENST00000589949 CD200R1Q8TD46 325 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 GPR21Q99679 349 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 FAM114A2Q9NRY5 505 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 ABCF3Q9NUQ8 709 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 TRPC4Q9UBN4 977 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 DHRS7Q9Y394 339 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 DOPEY1Q5JWR5 2465 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 CNTRLQ7Z7A1 2325 aa17.13■□□□□ 0.33
H3F3B-209ENST00000589949 MAGEB16A2A368 324 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 SMAPO00193 183 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 E2F3O00716 465 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 HAT1O14929 419 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 HPP00738 406 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 ERVK-10P10266 1014 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 COX6A1P12074 109 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 ACPPP15309 386 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 IMPA1P29218 277 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 SLC26A3P40879 764 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 SKIV2L2P42285 1042 aaKnown RBP17.12■□□□□ 0.33
H3F3B-209ENST00000589949 EMP3P54852 163 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 DSG2Q14126 1118 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 CCDC137Q6PK04 289 aaKnown RBP17.12■□□□□ 0.33
H3F3B-209ENST00000589949 KCNMB4Q86W47 210 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 DNAJB14Q8TBM8 379 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 KCNJ9Q92806 393 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 XAB2Q9HCS7 855 aaKnown RBP17.12■□□□□ 0.33
H3F3B-209ENST00000589949 C20orf96Q9NUD7 363 aaPredicted RBP17.12■□□□□ 0.33
H3F3B-209ENST00000589949 KLHL42Q9P2K6 505 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 PCYOX1Q9UHG3 505 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 FBXO5Q9UKT4 447 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 SH2B3Q9UQQ2 575 aa17.12■□□□□ 0.33
H3F3B-209ENST00000589949 CELSR2Q9HCU4 2923 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 CRYBG3Q68DQ2 2970 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 A0A0A6YYC8 382 aaPredicted RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 IDSB3KWA1 339 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 I3L1I5 382 aaPredicted RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 BANF1O75531 89 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 SYF2O95926 243 aaKnown RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 MPC1LP0DKB6 136 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 CARSP49589 748 aaKnown RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 MAT1AQ00266 395 aaKnown RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 EEF1A2Q05639 463 aaKnown RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 MFAP5Q13361 173 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
H3F3B-209ENST00000589949 FAAH2Q6GMR7 532 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 GRHL3Q8TE85 626 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 CNDP1Q96KN2 507 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 MACROD1Q9BQ69 325 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 ADAMTS6Q9UKP5 1117 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 VPS9D1Q9Y2B5 631 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 MAD1L1Q9Y6D9 718 aa17.11■□□□□ 0.33
H3F3B-209ENST00000589949 POLEQ07864 2286 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 A0A1W2PQ72 361 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 H7BY64 318 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 MAP2K7O14733 419 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 DDAH2O95865 285 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 PRR35P0CG20 571 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 EZRP15311 586 aaKnown RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 GABRB3P28472 473 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 HSD17B2P37059 387 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 TSFMP43897 325 aaKnown RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 EMP2P54851 167 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 NAA25Q14CX7 972 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 LONRF1Q17RB8 773 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 TTLL9Q3SXZ7 439 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 HSP90AA5PQ58FG0 334 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 ISLR2Q6UXK2 745 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 MBOAT1Q6ZNC8 495 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 PRSS41Q7RTY9 318 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 VN1R4Q7Z5H5 301 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 ZC3H7AQ8IWR0 971 aaKnown RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 MMABQ96EY8 250 aaPredicted RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 PBKQ96KB5 322 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 PRAP1Q96NZ9 151 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 NDNQ99608 321 aa17.1■□□□□ 0.33
H3F3B-209ENST00000589949 AARSD1Q9BTE6 412 aaKnown RBP17.1■□□□□ 0.33
H3F3B-209ENST00000589949 NOTCH2Q04721 2471 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 IGHV1-45A0A0A0MS14 117 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 PHF2O75151 1096 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 VPS26AO75436 327 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 JRKO75564 520 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 SOX11P35716 441 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 PGGT1BP53609 377 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 RELAQ04206 551 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 CDC16Q13042 620 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 ZXDCQ2QGD7 858 aaPredicted RBP17.09■□□□□ 0.33
H3F3B-209ENST00000589949 MSS51Q4VC12 460 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 RNASEH2BQ5TBB1 312 aaKnown RBP17.09■□□□□ 0.33
H3F3B-209ENST00000589949 IRAK1BP1Q5VVH5 260 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 ZNF787Q6DD87 383 aa17.09■□□□□ 0.33
H3F3B-209ENST00000589949 UBE2R2Q712K3 238 aaPredicted RBP17.09■□□□□ 0.33
H3F3B-209ENST00000589949 NDUFAF7Q7L592 441 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms