RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ANXA8L1Q5VT79 327 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 CPZQ66K79 652 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 PDE12Q6L8Q7 609 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 MED27Q6P2C8 311 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 ZNF621Q6ZSS3 439 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 TBC1D20Q96BZ9 403 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 NUS1Q96E22 293 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 DTNBP1Q96EV8 351 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 PPP1R16AQ96I34 528 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 MUS81Q96NY9 551 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 NPLQ9BXD5 320 aaPredicted RBP18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 TOR3AQ9H497 397 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 C3orf18Q9UK00 162 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 CORO2BQ9UQ03 480 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 ITM2BQ9Y287 266 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 DYRK1BQ9Y463 629 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 ORC6Q9Y5N6 252 aa18.53■□□□□ 0.56
PRKCSH-209ENST00000589838 LINC01553A4QN01 128 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 RPL10P27635 214 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 HPCAL1P37235 193 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 WNT3P56703 355 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 HNRNPA1L2Q32P51 320 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 CCSMST1Q4G0I0 132 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 CES5AQ6NT32 575 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 ZCCHC8Q6NZY4 707 aaKnown RBP18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 CFAP206Q8IYR0 622 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 RNF175Q8N4F7 328 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 OR7G3Q8NG95 312 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 CHTF18Q8WVB6 975 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 C11orf24Q96F05 449 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 LRRC3BQ96PB8 259 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 DUSP26Q9BV47 211 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 SOX17Q9H6I2 414 aaPredicted RBP18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 FAM118AQ9NWS6 357 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 BTNL2Q9UIR0 455 aa18.52■□□□□ 0.56
PRKCSH-209ENST00000589838 SCAMP2O15127 329 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 SCN2BO60939 215 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 ANXA4P09525 319 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 GPR1P46091 355 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 RAD23AP54725 363 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 TPD52P55327 224 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 EIF4HQ15056 248 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 HIST2H2ACQ16777 129 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 VMACQ2NL98 169 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF658BQ4V348 819 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 TCEAL5Q5H9L2 206 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 PAGE2BQ5JRK9 111 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 CPTPQ5TA50 214 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 HIST2H2AA3Q6FI13 130 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 SPESP1Q6UW49 350 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 CAMKMTQ7Z624 323 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 C12orf40Q86WS4 652 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 ETFBKMTQ8IXQ9 262 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 LILRA3Q8N6C8 439 aaPredicted RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 HERVK_113Q902F9 699 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 SMG7Q92540 1137 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 CXorf40BQ96DE9 158 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 TUBA1CQ9BQE3 449 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 EFCAB11Q9BUY7 163 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 ITM2CQ9NQX7 267 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 DEC1Q9P2X7 70 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 PCDHB11Q9Y5F2 797 aa18.52■□□□□ 0.55
PRKCSH-209ENST00000589838 C17orf113A0A1B0GUU1 675 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 MGAT4DA6NG13 374 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 LZTS3O60299 673 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 CPSF4O95639 269 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 PDHA2P29803 388 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 DCTP40126 519 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 MAGEA2P43356 314 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 ARHGDIAP52565 204 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 DPTQ07507 201 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 CAMK1Q14012 370 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 RAET1GQ6H3X3 334 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 SLCO4C1Q6ZQN7 724 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 CLVS1Q8IUQ0 354 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 TRAPPC5Q8IUR0 188 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 ZDHHC21Q8IVQ6 265 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 SYTL1Q8IYJ3 562 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 C1orf52Q8N6N3 182 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 VN1R2Q8NFZ6 395 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 CDC26Q8NHZ8 85 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF420Q8TAQ5 688 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 WDR34Q96EX3 536 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 PHF12Q96QT6 1004 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 OR2AG1Q9H205 316 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 SMURF2Q9HAU4 748 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 TRIM39Q9HCM9 518 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 DYRK4Q9NR20 520 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 MAGED1Q9Y5V3 778 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 AP1M2Q9Y6Q5 423 aa18.51■□□□□ 0.55
PRKCSH-209ENST00000589838 LRRK1Q38SD2 2015 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 TOP3AQ13472 1001 aaPredicted RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ELAVL3Q14576 367 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ZC3H12BQ5HYM0 836 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 C9orf64Q5T6V5 341 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ZNF773Q6PK81 442 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 ZZZ3Q8IYH5 903 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 C10orf111Q8N326 155 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 OR9A1PQ8NGU1 263 aa18.5■□□□□ 0.55
PRKCSH-209ENST00000589838 HUS1BQ8NHY5 278 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms