RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 WASHC2DQ5SRD0 308 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 CATSPEREQ5SY80 951 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 C6orf163Q5TEZ5 329 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 IQCHQ86VS3 1027 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 PARGQ86W56 976 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 KRT78Q8N1N4 520 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 FRMD1Q8N878 549 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 GLB1L3Q8NCI6 653 aaPredicted RBP11.63□□□□□ -0.55
CCBE1-203ENST00000589116 OR52E1Q8NGJ3 308 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 PROKR1Q8TCW9 393 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 GPBAR1Q8TDU6 330 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 SH3KBP1Q96B97 665 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 SPDL1Q96EA4 605 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 KLHDC7BQ96G42 594 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 FCRL1Q96LA6 429 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 SERPINI1Q99574 410 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 NPAS2Q99743 824 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 WDR41Q9HAD4 459 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 NMRK1Q9NWW6 199 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 GEMIN8Q9NWZ8 242 aaKnown RBP11.63□□□□□ -0.55
CCBE1-203ENST00000589116 VPS29Q9UBQ0 182 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 TAC3Q9UHF0 121 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 SH2B3Q9UQQ2 575 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 FANCMQ8IYD8 2048 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
CCBE1-203ENST00000589116 A0A088AWK7 358 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 A0A1W2PP18 115 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 AXIN1O15169 862 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CDH1P12830 882 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CAPN3P20807 821 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SERPINB1P30740 379 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SHMT2P34897 504 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PIK3CBP42338 1070 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 POLR2JP52435 117 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 NME5P56597 212 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 UFM1P61960 85 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 EIF2B5Q13144 721 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 FZD2Q14332 565 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 USP39Q53GS9 565 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PGM2L1Q6PCE3 622 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SLC30A9Q6PML9 568 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 FAM129CQ86XR2 697 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 NRROSQ86YC3 692 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PHACTR4Q8IZ21 702 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 MFSD2AQ8NA29 543 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 LINC01555Q8NAE3 123 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ABHD11Q8NFV4 315 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ZFPM2Q8WW38 1151 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SLC6A18Q96N87 628 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ZBTB18Q99592 522 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SLC52A3Q9NQ40 469 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 AASDHPPTQ9NRN7 309 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SCHIP1Q9P0W5 487 aaPredicted RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ADGRE2Q9UHX3 823 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PCDHB11Q9Y5F2 797 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 K7ESF4 209 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SCAMP1O15126 338 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 EEDO75530 441 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PCNAP12004 261 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 BCKDHAP12694 445 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 AMD1P17707 334 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ZFP36L2P47974 494 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 PXNP49023 591 aaPredicted RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CCR8P51685 355 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 MTTPP55157 894 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 RACK1P63244 317 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ABATP80404 500 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 TRMT5Q32P41 509 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SPIN4Q56A73 249 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 FBXW10Q5XX13 1052 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 TMIGD1Q6UXZ0 262 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 NET1Q7Z628 596 aaPredicted RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 LIX1Q8N485 282 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 LMNTD1Q8N9Z9 388 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CCL4L1Q8NHW4 92 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 HUS1BQ8NHY5 278 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 TEX37Q96LM6 180 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 MTERF1Q99551 399 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 AIF1LQ9BQI0 150 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 ACTL8Q9H568 366 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 NT5DC2Q9H857 520 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 OR6C2Q9NZP2 312 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 SLC7A8Q9UHI5 535 aa11.62□□□□□ -0.55
CCBE1-203ENST00000589116 LEF1Q9UJU2 399 aaPredicted RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 RUVBL1Q9Y265 456 aaKnown RBP11.62□□□□□ -0.55
CCBE1-203ENST00000589116 CCDC154A6NI56 674 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 A8MUI8 341 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 MAGEB17A8MXT2 336 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 CFLARO15519 480 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 CCNDBP1O95273 360 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 NPPAP01160 153 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 CD38P28907 300 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 HOXA6P31267 233 aa11.61□□□□□ -0.55
CCBE1-203ENST00000589116 CLNS1AP54105 237 aaKnown RBP11.61□□□□□ -0.55
CCBE1-203ENST00000589116 REEP5Q00765 189 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms