RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ABATP80404 500 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 CDK16Q00536 496 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 RBPJQ06330 500 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 FASTKQ14296 549 aaKnown RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 NDUFA9Q16795 377 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 CTSL3PQ5NE16 218 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 ZNF425Q6IV72 752 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 LRRC8BQ6P9F7 803 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 DRICH1Q6PGQ1 229 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 XKRXQ6PP77 449 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 BNC2Q6ZN30 1099 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 NEK10Q6ZWH5 1172 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 SLC13A5Q86YT5 568 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 SIRT6Q8N6T7 355 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 CSNK1A1LQ8N752 337 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 AMER3Q8N944 861 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 FBXO15Q8NCQ5 510 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 RERGQ96A58 199 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 MMABQ96EY8 250 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 IMMP1LQ96LU5 166 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 BAG1Q99933 345 aaPredicted RBP13.28□□□□□ -0.28
VMP1-209ENST00000588915 KIFC1Q9BW19 673 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 ACAT2Q9BWD1 397 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 YIPF2Q9BWQ6 316 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 DRC3Q9H069 523 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 FAM114A2Q9NRY5 505 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 STMN3Q9NZ72 180 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 SEC14L3Q9UDX4 400 aa13.28□□□□□ -0.28
VMP1-209ENST00000588915 IGKV1-8A0A0C4DH67 115 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 CDK2AP1O14519 115 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 FOXS1O43638 330 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 UNC5CO95185 931 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 CATP04040 527 aaKnown RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 UQCRHP07919 91 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 ETS1P14921 441 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 POU3F2P20265 443 aaPredicted RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 AGAP20933 346 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 NMBRP28336 390 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 FMO4P31512 558 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 YBX1P67809 324 aaKnown RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 EEF1A2Q05639 463 aaKnown RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 PCOLCEQ15113 449 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 CCNG2Q16589 344 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 ZXDCQ2QGD7 858 aaPredicted RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 HKDC1Q2TB90 917 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 ICE2Q659A1 982 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 HIBCHQ6NVY1 386 aaPredicted RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 MRGPRGQ86SM5 289 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 C1orf54Q8WWF1 131 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 METTL21AQ8WXB1 218 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 LPGAT1Q92604 370 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 CCDC120Q96HB5 630 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 EBNA1BP2Q99848 306 aaKnown RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 STOX2Q9P2F5 926 aaPredicted RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 KLHL42Q9P2K6 505 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 RUVBL2Q9Y230 463 aaKnown RBP13.27□□□□□ -0.29
VMP1-209ENST00000588915 VPS9D1Q9Y2B5 631 aa13.27□□□□□ -0.29
VMP1-209ENST00000588915 TRGV8A0A0C4DH27 118 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 ARHGEF33A8MVX0 844 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 H0YIG0 161 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 CCL21O00585 134 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 PRAMEF2O60811 474 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 VAPBO95292 243 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 MLYCDO95822 493 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 C8orf89P0DMQ9 161 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 ITGAMP11215 1152 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 CHRM3P20309 590 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 OGNP20774 298 aaKnown RBP13.26□□□□□ -0.29
VMP1-209ENST00000588915 HRH2P25021 359 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 RPL22P35268 128 aaKnown RBP13.26□□□□□ -0.29
VMP1-209ENST00000588915 AVPR1BP47901 424 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 PNLIPRP1P54315 467 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 CASP6P55212 293 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 KLHL38Q2WGJ6 581 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.26□□□□□ -0.29
VMP1-209ENST00000588915 SUSD1Q6UWL2 747 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 ZC3H7AQ8IWR0 971 aaKnown RBP13.26□□□□□ -0.29
VMP1-209ENST00000588915 OTUD6BQ8N6M0 293 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 ZNF354BQ96LW1 612 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 HEATR5BQ9P2D3 2071 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
VMP1-209ENST00000588915 MKL2Q9ULH7 1088 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 ZKSCAN5Q9Y2L8 839 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 OTOGQ6ZRI0 2925 aa13.26□□□□□ -0.29
VMP1-209ENST00000588915 KRT87PA6NCN2 255 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 E7ENX8 843 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 NIPSNAP2O75323 286 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 MST1P26927 711 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 ARNTP27540 789 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 HTR1EP28566 365 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 CRADDP78560 199 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 TAP2Q03519 686 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 SNX1Q13596 522 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 TTLL9Q3SXZ7 439 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 KRTCAP3Q53RY4 240 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms