RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ADCK2Q7Z695 626 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 MILR1Q7Z6M3 343 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 AGAP11Q8TF27 550 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF75CPQ92670 426 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 THAP11Q96EK4 314 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 NSUN5Q96P11 429 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 SARGQ9BW04 601 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 SLC29A3Q9BZD2 475 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ZNF768Q9H5H4 540 aaKnown RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 CCDC134Q9H6E4 229 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 NT5DC2Q9H857 520 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 MID1IP1Q9NPA3 183 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 ADGRE2Q9UHX3 823 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 BTRCQ9Y297 605 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 PTPRZ1P23471 2315 aaPredicted RBP16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
SCAMP4-211ENST00000588907 OR2A25A4D2G3 310 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 SNNO75324 88 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 CRCPO75575 148 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 MSL3P1P0C860 447 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 JUPP14923 745 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 EPORP19235 508 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 MAGP20916 626 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 CCKBRP32239 447 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 HK2P52789 917 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 HSD11B2P80365 405 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 REEP5Q00765 189 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 CFHR1Q03591 330 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 BST1Q10588 318 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 TRAF3Q13114 568 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 ARL13AQ5H913 290 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 CUZD1Q86UP6 607 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 CACTIN-AS1Q8N1I8 211 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 OR52B6Q8NGF0 335 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 KLHL6Q8WZ60 621 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 FAM122AQ96E09 287 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 TRAPPC9Q96Q05 1148 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 STRADBQ9C0K7 418 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 ILKAPQ9H0C8 392 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 PDE7BQ9NP56 450 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 SLC6A20Q9NP91 592 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 PFDN4Q9NQP4 134 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 TOR4AQ9NXH8 423 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 AKAP7Q9P0M2 348 aaPredicted RBP16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 TSC22D4Q9Y3Q8 395 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 PCDHGA11Q9Y5H2 935 aa16.3■□□□□ 0.2
SCAMP4-211ENST00000588907 IGKV1-8A0A0C4DH67 115 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 IGHV5-10-1A0A0J9YXX1 117 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 TRBC2A0A5B9 178 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 H0YIV9 168 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 H7BY64 318 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 CHEK2O96017 543 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 HGFP14210 728 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 MLLT3P42568 568 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 NOVA1P51513 510 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 PPP1CAP62136 330 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 CSNK1G2P78368 415 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 PHEXP78562 749 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 DOC2AQ14183 400 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 SLBPQ14493 270 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 MED27Q6P2C8 311 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 TRIM73Q86UV7 250 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 PAQR7Q86WK9 346 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 MYLK4Q86YV6 388 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 SLITRK4Q8IW52 837 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 OR4F6Q8NGB9 312 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 SLC41A2Q96JW4 573 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 FAR2Q96K12 515 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 C7orf26Q96N11 449 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 PRAP1Q96NZ9 151 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 DEPDC7Q96QD5 511 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 ZFYVE21Q9BQ24 234 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 FANCEQ9HB96 536 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 CUEDC1Q9NWM3 386 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 GEMIN8Q9NWZ8 242 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 SOHLH2Q9NX45 425 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 HAO1Q9UJM8 370 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 ATXN7L1Q9ULK2 861 aaPredicted RBP16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 SNX6Q9UNH7 406 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 RAP2CQ9Y3L5 183 aa16.29■□□□□ 0.2
SCAMP4-211ENST00000588907 HEATR5BQ9P2D3 2071 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 KCNE1BA0A087WTH5 132 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SLC9B1P1A6NJY1 282 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 KRT6AP02538 564 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 KRT6BP04259 564 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 FGF4P08620 206 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 FTH1P19P0C7X4 201 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 UROSP10746 265 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 HOXB3P14651 431 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 ST6GAL1P15907 406 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 NELFEP18615 380 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 AHRP35869 848 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 KRT6CP48668 564 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 INHBCP55103 352 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SH3BP2P78314 561 aa16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 SIM1P81133 766 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-211ENST00000588907 INSM1Q01101 510 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms