RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ABATP80404 500 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 REEP5Q00765 189 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 FRG2Q64ET8 278 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 TMEM198Q66K66 360 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 NXNQ6DKJ4 435 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 ZCCHC8Q6NZY4 707 aaKnown RBP10.87□□□□□ -0.67
VMP1-207ENST00000588131 MED27Q6P2C8 311 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 RNF165Q6ZSG1 346 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 ACAD11Q709F0 780 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LARP4Q71RC2 724 aaKnown RBP eCLIP10.87□□□□□ -0.67
VMP1-207ENST00000588131 ZNF438Q7Z4V0 828 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 OOSP2Q86WS3 158 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 PLD3Q8IV08 490 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LAS2Q8IYD9 372 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CHCHD4Q8N4Q1 142 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 MINDY1Q8N5J2 469 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 OR7G3Q8NG95 312 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 OR4K1Q8NGD4 311 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 OR4C6Q8NH72 309 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 ACTRT2Q8TDY3 377 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 SELENOMQ8WWX9 145 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CCT6BQ92526 530 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 PPM1MQ96MI6 270 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 FRG2BQ96QU4 278 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 DPH7Q9BTV6 452 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.87□□□□□ -0.67
VMP1-207ENST00000588131 ELOVL6Q9H5J4 265 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 AKTIPQ9H8T0 292 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 LRIT1Q9P2V4 623 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 SNX6Q9UNH7 406 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CCL27Q9Y4X3 112 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 U3KQA8 63 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 CACNA1EQ15878 2313 aa10.87□□□□□ -0.67
VMP1-207ENST00000588131 PCM1Q15154 2024 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 RHPN2P1A8MT19 583 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 C2orf74A8MZ97 194 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SLC28A1O00337 649 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 FCHO1O14526 889 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SIGLEC6O43699 453 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 NUDT21O43809 227 aaKnown RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 UBXN7O94888 489 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 PROS1P07225 676 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 PRR35P0CG20 571 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ALPPL2P10696 532 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 GRIA3P42263 894 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 CAPZBP47756 277 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 OR1D5P58170 312 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 HMGCS1Q01581 520 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 IFT88Q13099 833 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 LAPTM5Q13571 262 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 DDX39BQ13838 428 aaKnown RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 RBBP5Q15291 538 aaKnown RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 PAGE2BQ5JRK9 111 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ZNF425Q6IV72 752 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SPESP1Q6UW49 350 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 TRIM46Q7Z4K8 759 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 VN1R5Q7Z5H4 357 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ADCK2Q7Z695 626 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 MTDHQ86UE4 582 aaKnown RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.86□□□□□ -0.67
VMP1-207ENST00000588131 EID2Q8N6I1 236 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 CEP70Q8NHQ1 597 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SLC22A18Q96BI1 424 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 TUBGCP3Q96CW5 907 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 MARK4Q96L34 752 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 APOLD1Q96LR9 279 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 CATSPER2Q96P56 530 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 AIF1LQ9BQI0 150 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 DUSP23Q9BVJ7 150 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ACPTQ9BZG2 426 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 NMUR2Q9GZQ4 415 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ABCG4Q9H172 646 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 MYLK2Q9H1R3 596 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SYNPO2LQ9H987 977 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 PADI4Q9UM07 663 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 G3BP2Q9UN86 482 aaKnown RBP10.86□□□□□ -0.67
VMP1-207ENST00000588131 PCDHGA11Q9Y5H2 935 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 ENTPD2Q9Y5L3 495 aa10.86□□□□□ -0.67
VMP1-207ENST00000588131 SERTM1A2A2V5 107 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 MAGEB17A8MXT2 336 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 HAT1O14929 419 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 LSM1O15116 133 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 CASC3O15234 703 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 B4GAT1O43505 415 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 LCMT2O60294 686 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 PCDHGA12O60330 932 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 PEX11AO75192 247 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 DCTN3O75935 186 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 ETHE1O95571 254 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 RETP07949 1114 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 ALDOCP09972 364 aaKnown RBP10.85□□□□□ -0.67
VMP1-207ENST00000588131 PVRP15151 417 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 GLB1P16278 677 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 AMD1P17707 334 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 LBPP18428 481 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 MAGP20916 626 aa10.85□□□□□ -0.67
VMP1-207ENST00000588131 CXCR2P25025 360 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms