RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	TARM1	B6A8C7	271 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	RASGRF2	O14827	1237 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	ASNA1	O43681	348 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	SEC31A	O94979	1220 aa	Known RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	HEXB	P07686	556 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	PECAM1	P16284	738 aa	Predicted RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	EEF1D	P29692	281 aa	Known RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CTNNA1	P35221	906 aa	Known RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CDKN1C	P49918	316 aa	Predicted RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CBX1	P83916	185 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	OLIG2	Q13516	323 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	DHX34	Q14147	1143 aa	Known RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	PCOLCE	Q15113	449 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CES4A	Q5XG92	561 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	RANBP10	Q6VN20	620 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	TAS2R42	Q7RTR8	314 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	LAPTM4B	Q86VI4	370 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	DOLPP1	Q86YN1	238 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	GOLGA6L1	Q8N7Z2	621 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	ZUFSP	Q96AP4	578 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	TUBB6	Q9BUF5	446 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	GBA3	Q9H227	469 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	SMARCAL1	Q9NZC9	954 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	TRPC4	Q9UBN4	977 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	KCNN3	Q9UGI6	736 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	DMGDH	Q9UI17	866 aa	Known RBP	13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CDC14A	Q9UNH5	594 aa		13.97	□□□□□ -0.17
RANBP3-208	ENST00000587263	CCL22	O00626	93 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	CTSV	O60911	334 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	MED26	O95402	600 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	RPN2	P04844	631 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	FOSL1	P15407	271 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	DSG2	Q14126	1118 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	DNAJC21	Q5F1R6	531 aa	Known RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	LRRC38	Q5VT99	294 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	ITPRIPL1	Q6GPH6	555 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	TAX1BP1	Q86VP1	789 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	TAB3	Q8N5C8	712 aa	Predicted RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	TMEM178A	Q8NBL3	297 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	FAM98A	Q8NCA5	519 aa	Known RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	OR2L8	Q8NGY9	312 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	ASB5	Q8WWX0	329 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	P3H4	Q92791	437 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	MS4A14	Q96JA4	679 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	ZNF354B	Q96LW1	612 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	FRMD6	Q96NE9	622 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	APOL2	Q9BQE5	337 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	YIPF2	Q9BWQ6	316 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	RAB17	Q9H0T7	212 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	SLC24A3	Q9HC58	644 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	HOMER3	Q9NSC5	361 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	DDX56	Q9NY93	547 aa	Known RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	PSD3	Q9NYI0	1048 aa		13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	MAP1A	P78559	2803 aa	Predicted RBP	13.96	□□□□□ -0.17
RANBP3-208	ENST00000587263	PRRC2A	P48634	2157 aa	Known RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263		H7C0S8	307 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	ADAM10	O14672	748 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	CST8	O60676	142 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	SLCO2B1	O94956	709 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	EIF2S1	P05198	315 aa	Known RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	ERVK-10	P10266	1014 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	ADRA1A	P35348	466 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	RWDD2B	P57060	319 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	ITIH4	Q14624	930 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	DBN1	Q16643	649 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	CYP1B1	Q16678	543 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	FRMPD2B	Q6IN97	320 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	MFSD7	Q6UXD7	560 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	C3P1	Q6ZMU1	363 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	DCUN1D3	Q8IWE4	304 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	MDS2	Q8NDY4	140 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	MVB12A	Q96EY5	273 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	DNAJC1	Q96KC8	554 aa	Known RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	IMMP1L	Q96LU5	166 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	KRT12	Q99456	494 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	TRIM51	Q9BSJ1	452 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	MENT	Q9BUN1	341 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	GSX1	Q9H4S2	264 aa	Predicted RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	KLHL1	Q9NR64	748 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	FAM114A2	Q9NRY5	505 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	MKL2	Q9ULH7	1088 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	AAR2	Q9Y312	384 aa	Known RBP	13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263	ABCA4	P78363	2273 aa		13.95	□□□□□ -0.18
RANBP3-208	ENST00000587263		A8MUI8	341 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	HACD1	B0YJ81	288 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	ZWINT	O95229	277 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	OR56A5	P0C7T3	313 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	PRSS56	P0CW18	603 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	CD46	P15529	392 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	CDKN2B	P42772	138 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	FOXD4	Q12950	439 aa	Predicted RBP	13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	MSLN	Q13421	630 aa	Predicted RBP	13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	TUBA3C	Q13748	450 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	ACER2	Q5QJU3	275 aa		13.94	□□□□□ -0.18
RANBP3-208	ENST00000587263	SEL1L2	Q5TEA6	688 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms