RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PTGDR2Q9Y5Y4 395 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.05□□□□□ -0.8
LIG3-203ENST00000585370 ANKRD12Q6UB98 2062 aa10.05□□□□□ -0.8
LIG3-203ENST00000585370 DSPP15924 2871 aaKnown RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 CCDC154A6NI56 674 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 MEI4A8MW99 385 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 C10orf142B7Z368 130 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 E7ENX8 843 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 FOXE1O00358 373 aaPredicted RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 FBP2O00757 339 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 SLC31A1O15431 190 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 LATO43561 262 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 SEMA4FO95754 770 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 PDYNP01213 254 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 C1GALT1C1LP0DN25 315 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 ERGP11308 486 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 CEACAM1P13688 526 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 NPPBP16860 134 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 ME2P23368 584 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 JAK1P23458 1154 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 NDUFS1P28331 727 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 CLNS1AP54105 237 aaKnown RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 DIO3P55073 304 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 PSME3P61289 254 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 PHEXP78562 749 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 TAP2Q03519 686 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 RCAN2Q14206 197 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 UAP1L1Q3KQV9 507 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 RFTN2Q52LD8 501 aaPredicted RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 TCHHL1Q5QJ38 904 aaPredicted RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 MED27Q6P2C8 311 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 CYP20A1Q6UW02 462 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 SLCO4C1Q6ZQN7 724 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 FAM124AQ86V42 546 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 SYT12Q8IV01 421 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 LRRC56Q8IYG6 542 aaPredicted RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 PGBD3Q8N328 593 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 MINDY1Q8N5J2 469 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 DEFB119Q8N690 84 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 ENDOVQ8N8Q3 282 aaKnown RBP10.04□□□□□ -0.8
LIG3-203ENST00000585370 SMPDL3AQ92484 453 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 SPACA7Q96KW9 195 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 WDR92Q96MX6 357 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 NPAS2Q99743 824 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 RNPEPL1Q9HAU8 725 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 PILRBQ9UKJ0 227 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 PPT2Q9UMR5 302 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 AP3M1Q9Y2T2 418 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 GPSM3Q9Y4H4 160 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 ZFYVE26Q68DK2 2539 aa10.04□□□□□ -0.8
LIG3-203ENST00000585370 TNRC6BQ9UPQ9 1833 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 C15orf38-AP3S2A0A0A6YYH1 394 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PRSS38A1L453 326 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PRR19A6NJB7 356 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 A8MUI8 341 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PRAMEF26H0Y7S4 382 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 NR5A2O00482 541 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 TRIM38O00635 465 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PRMT3O60678 531 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 EEDO75530 441 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 MYO1DO94832 1006 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 STAMBPO95630 424 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 IL6P05231 212 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 G6PDP11413 515 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 ACP5P13686 325 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 ENGP17813 658 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SPINK2P20155 84 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 CSRP1P21291 193 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 SERPINB1P30740 379 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 MAT2AP31153 395 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 ACSL1P33121 698 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 UFM1P61960 85 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PPP2CBP62714 309 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PPP2CAP67775 309 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 TRAP1Q12931 704 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 PLA2G4EQ3MJ16 856 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 CCSMST1Q4G0I0 132 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SGO1Q5FBB7 561 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PIGGQ5H8A4 983 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SAMD4BQ5PRF9 694 aaKnown RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 PEAR1Q5VY43 1037 aaPredicted RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 C8orf82Q6P1X6 216 aaPredicted RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 SLC23A3Q6PIS1 610 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 NXPE4Q6UWF7 544 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 CHST15Q7LFX5 561 aaPredicted RBP10.03□□□□□ -0.8
LIG3-203ENST00000585370 ARPINQ7Z6K5 226 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 KRT78Q8N1N4 520 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 DPP10Q8N608 796 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 WDR20Q8TBZ3 569 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 PROKR1Q8TCW9 393 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 SLC5A11Q8WWX8 675 aa10.03□□□□□ -0.8
LIG3-203ENST00000585370 STARD8Q92502 1023 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms