RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 G0S2P27469 103 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 HOXD9P28356 352 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RABIFP47224 123 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PSMD8P48556 350 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 C21orf59P57076 290 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NUP107P57740 925 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ATP6V0D1P61421 351 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC14A1Q13336 389 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ATP6AP1Q15904 470 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MEP1AQ16819 746 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GPR139Q6DWJ6 353 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC39A11Q8N1S5 342 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 BBS5Q8N3I7 341 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TEX26Q8N6G2 289 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TBC1D15Q8TC07 691 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GANCQ8TET4 914 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CDKN2AIPNLQ96HQ2 116 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC22A12Q96S37 553 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UHRF1Q96T88 793 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TM9SF3Q9HD45 589 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CATSPERZQ9NTU4 200 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ACTR3BQ9P1U1 418 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PADI4Q9UM07 663 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PCDHA9Q9Y5H5 950 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 FNDC1Q4ZHG4 1894 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 F5H5T6 163 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LDLRP01130 860 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MBL2P11226 248 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RFC2P35250 354 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 KCNJ10P78508 379 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PTPRNQ16849 979 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ENPP6Q6UWR7 440 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 HM13Q8TCT9 377 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ATOH8Q96SQ7 321 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PHOX2BQ99453 314 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 POLR1EQ9GZS1 481 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 GID8Q9NWU2 228 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR6C2Q9NZP2 312 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 FKBPLQ9UIM3 349 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ST14Q9Y5Y6 855 aa11.28□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DOCK4Q8N1I0 1966 aa11.27□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DOCK6Q96HP0 2047 aa11.27□□□□□ -0.6
CDK5RAP3-231ENST00000584063 IGLV3-10A0A075B6K4 115 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SH3PXD2BA1X283 911 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LCHNA4D1U4 455 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SNAP91O60641 907 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FUCA1P04066 466 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GSTM1P09488 218 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CORO1AP31146 461 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CTNNB1P35222 781 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CAPGP40121 348 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GDF5P43026 501 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CARTPTQ16568 116 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CYP2A13Q16696 494 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 EEF1AKMT1Q8WVE0 214 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TMBIM1Q969X1 311 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ROPN1LQ96C74 230 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PLEKHA8Q96JA3 519 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CSF3RQ99062 836 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LHPPQ9H008 270 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SMG9Q9H0W8 520 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZFP14Q9HCL3 533 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CD274Q9NZQ7 290 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CYB5R1Q9UHQ9 305 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PCDHGA1Q9Y5H4 931 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GPR45Q9Y5Y3 372 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CBX4O00257 560 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LZTS3O60299 673 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PRAMEF11O60813 436 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 SLC22A3O75751 556 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 RASAL1O95294 804 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CXCL14O95715 111 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 FGBP02675 491 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 KLKB1P03952 638 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OCM2P0CE71 109 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 OCMP0CE72 109 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 POLR2JP52435 117 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 HK3P52790 923 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CBX2Q14781 532 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF425Q6IV72 752 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ANKRD26P1Q6NSI1 321 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 CCDC117Q8IWD4 279 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 PHACTR4Q8IZ21 702 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TCAIMQ8N3R3 496 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 ZNF671Q8TAW3 534 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 IFI44Q8TCB0 444 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 TADA1Q96BN2 335 aa11.27□□□□□ -0.61
CDK5RAP3-231ENST00000584063 L3HYPDHQ96EM0 354 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms