RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 TGFBIQ15582 683 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 METTL2BQ6P1Q9 378 aaKnown RBP17.26■□□□□ 0.35
SNX11-212ENST00000583320 TTC23LQ6PF05 361 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 FRA10AC1Q70Z53 315 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 KIRREL3Q8IZU9 778 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 PDPRQ8NCN5 879 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 TRMOQ9BU70 441 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 ERVK-6Q9BXR3 956 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 TRIM54Q9BYV2 358 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 SLCO1B3Q9NPD5 702 aa17.26■□□□□ 0.35
SNX11-212ENST00000583320 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.26■□□□□ 0.35
SNX11-212ENST00000583320 ANKRD12Q6UB98 2062 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 A8MU76 341 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 NDUFAB1O14561 156 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 SNX2O60749 519 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PSIP1O75475 530 aaKnown RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 STK17BO94768 372 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 S100BP04271 92 aaPredicted RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 VCLP18206 1134 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CYP2A7P20853 494 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 GNPDA1P46926 289 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 NAGLUP54802 743 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 AP1S2P56377 157 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 ABHD18Q0P651 414 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 ILF3Q12906 894 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNX11-212ENST00000583320 ESPL1Q14674 2120 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 SETDB1Q15047 1291 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 SNAP47Q5SQN1 464 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CES4AQ5XG92 561 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 TCTN3Q6NUS6 607 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 TMEM71Q6P5X7 295 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CRTC3Q6UUV7 619 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 NAPRTQ6XQN6 538 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 ZCCHC23Q6ZST2 131 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 FAM47EQ6ZV65 393 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 ASB18Q6ZVZ8 466 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PIGWQ7Z7B1 504 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CRLF3Q8IUI8 442 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 VRK3Q8IV63 474 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CFAP206Q8IYR0 622 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 TCAIMQ8N3R3 496 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PTGR2Q8N8N7 351 aaPredicted RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 FBXO15Q8NCQ5 510 aaPredicted RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 PPP4R1Q8TF05 950 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 ZNF473Q8WTR7 871 aaKnown RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 FOPNLQ96NB1 174 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 GSDMCQ9BYG8 508 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PARVBQ9HBI1 364 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 CD274Q9NZQ7 290 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PDP2Q9P2J9 529 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 HAO1Q9UJM8 370 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 SUFUQ9UMX1 484 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 PLEKHM1Q9Y4G2 1056 aa17.25■□□□□ 0.35
SNX11-212ENST00000583320 TNPO3Q9Y5L0 923 aaKnown RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 TNRC6AQ8NDV7 1962 aaKnown RBP17.25■□□□□ 0.35
SNX11-212ENST00000583320 VPS4BO75351 444 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 DLGAP3O95886 979 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 PBLDP30039 288 aaPredicted RBP17.24■□□□□ 0.35
SNX11-212ENST00000583320 STAT5AP42229 794 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 HK2P52789 917 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 CTBSQ01459 385 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 MC2RQ01718 297 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 PFKFB4Q16877 469 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 PYCR3Q53H96 274 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 CFAP157Q5JU67 520 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 ZNF678Q5SXM1 525 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 METRNLQ641Q3 311 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 SULT1C3Q6IMI6 304 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 UBE2R2Q712K3 238 aaPredicted RBP17.24■□□□□ 0.35
SNX11-212ENST00000583320 GALNT13Q8IUC8 556 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 GALNT11Q8NCW6 608 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 MCOLN3Q8TDD5 553 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 EXT2Q93063 718 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 PHF21BQ96EK2 531 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 TMEM237Q96Q45 408 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 TEFMQ96QE5 360 aaKnown RBP17.24■□□□□ 0.35
SNX11-212ENST00000583320 ZNHIT2Q9UHR6 403 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 ADAMTS6Q9UKP5 1117 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 ACSL5Q9ULC5 683 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 VPS4AQ9UN37 437 aa17.24■□□□□ 0.35
SNX11-212ENST00000583320 TMEM184BQ9Y519 407 aaPredicted RBP17.24■□□□□ 0.35
SNX11-212ENST00000583320 PABPN1LA6NDY0 278 aaKnown RBP17.23■□□□□ 0.35
SNX11-212ENST00000583320 ITM2AO43736 263 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 SNX3O60493 162 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 CATP04040 527 aaKnown RBP17.23■□□□□ 0.35
SNX11-212ENST00000583320 RPS17P08708 135 aaKnown RBP17.23■□□□□ 0.35
SNX11-212ENST00000583320 ANXA5P08758 320 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 HIST1H2AGP0C0S8 130 aaPredicted RBP17.23■□□□□ 0.35
SNX11-212ENST00000583320 TROVE2P10155 538 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX11-212ENST00000583320 HIST1H2ADP20671 130 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 DCTP40126 519 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 CLCNKAP51800 687 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 MC1RQ01726 317 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 BIRC2Q13490 618 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 PCBP2Q15366 365 aaKnown RBP eCLIP17.23■□□□□ 0.35
SNX11-212ENST00000583320 PHKG1Q16816 387 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 CRTC2Q53ET0 693 aaPredicted RBP17.23■□□□□ 0.35
SNX11-212ENST00000583320 UNC50Q53HI1 259 aa17.23■□□□□ 0.35
SNX11-212ENST00000583320 GKAP1Q5VSY0 366 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms