RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 A8MT66 165 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 TARM1B6A8C7 271 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 TOX3O15405 576 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 CAPN5O15484 640 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 DLX3O60479 287 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 CSO75390 466 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 DNAJC8O75937 253 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 UBOX5O94941 541 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 C9P02748 559 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 KITP10721 976 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 SCTRP47872 440 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 MNAT1P51948 309 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 NAGLUP54802 743 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 SF3A3Q12874 501 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■□□ 17.5
CSNK1D-220ENST00000581737 KIR2DS3Q14952 304 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 ISXQ2M1V0 245 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 PHF19Q5T6S3 580 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 IRGCQ6NXR0 463 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 TMEM207Q6UWW9 146 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 FBXO39Q8N4B4 442 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 HMGCLL1Q8TB92 370 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 ATL1Q8WXF7 558 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 L3HYPDHQ96EM0 354 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 CCDC138Q96M89 665 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 TGM7Q96PF1 710 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 XKR8Q9H6D3 395 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 NUDT4Q9NZJ9 180 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 PLAGL1Q9UM63 463 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 COL27A1Q8IZC6 1860 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 NPEPPSL1A6NEC2 478 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 TLCD2A6NGC4 264 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 SUPT3HB4E1H0 165 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 B8ZZF3 427 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 STX16-NPEPL1H3BU86 382 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 STX16O14662 325 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 HGSO14964 777 aaPredicted RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 HDAC3O15379 428 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 SUPT3HO75486 399 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 FKBP9O95302 570 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 SERPINA6P08185 405 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 ANKRD34CP0C6C1 535 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 THRAP10827 490 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 POLR2CP19387 275 aaPredicted RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 IMPDH1P20839 514 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 PGGT1BP53609 377 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 HERVK_113P63132 956 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ZFP36L1Q07352 338 aaKnown RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 DLG1Q12959 904 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 BNIP1Q12981 228 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 EIF3IQ13347 325 aaKnown RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 GRB7Q14451 532 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 KRT72Q14CN4 511 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 CYP2A13Q16696 494 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 METTL21CQ5VZV1 264 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 PRSS42Q7Z5A4 293 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ISCA2Q86U28 154 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ADGRF3Q8IZF5 1079 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 FITM2Q8N6M3 262 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF248Q8NDW4 579 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 LIN37Q96GY3 246 aaPredicted RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 MENTQ9BUN1 341 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ERVK-6Q9BXR3 956 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 MYLK2Q9H1R3 596 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ARL15Q9NXU5 204 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 ACTR10Q9NZ32 417 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 PDP2Q9P2J9 529 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 PDE10AQ9Y233 779 aa13□□□□□ -0.33
CSNK1D-220ENST00000581737 TNPO3Q9Y5L0 923 aaKnown RBP13□□□□□ -0.33
CSNK1D-220ENST00000581737 NAV2Q8IVL1 2488 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CCDC187A0A096LP49 1063 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 IGHV5-10-1A0A0J9YXX1 117 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CASC3O15234 703 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC22A2O15244 555 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 MAP3K7O43318 606 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 DIAPH2O60879 1101 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 LYPLA1O75608 230 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 RASSF9O75901 435 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 UNC5CO95185 931 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC16A8O95907 504 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 ERGP11308 486 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SERPINB3P29508 390 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 GFERP55789 205 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 IRX1P78414 480 aaPredicted RBP12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CDKL1Q00532 357 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 TSNQ15631 228 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 GALNTL6Q49A17 601 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms