RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 HKDC1Q2TB90 917 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 AGAP7PQ5VUJ5 663 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 ATG9BQ674R7 924 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 LRRC8EQ6NSJ5 796 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 CUZD1Q86UP6 607 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 SPNS2Q8IVW8 549 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 CPNE9Q8IYJ1 553 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 C2CD4AQ8NCU7 369 aaPredicted RBP21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 AGAP4Q96P64 663 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 ASF1BQ9NVP2 202 aa21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 STOX2Q9P2F5 926 aaPredicted RBP21.72■■□□□ 1.07
CDKN2A-212ENST00000578845 TXNDC9O14530 226 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 DNALI1O14645 258 aaPredicted RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 ZSCAN12O43309 604 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 TTC4O95801 387 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 HPP00738 406 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 ACPPP15309 386 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 SLC26A3P40879 764 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 TIAL1Q01085 375 aaKnown RBP eCLIP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 Q0VFX4 171 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 MRPL49Q13405 166 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 TSTA3Q13630 321 aaPredicted RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 PTK6Q13882 451 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 IRAK1BP1Q5VVH5 260 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 UBE2R2Q712K3 238 aaPredicted RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 PIWIL4Q7Z3Z4 852 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 CNTN4Q8IWV2 1026 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 AMER3Q8N944 861 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 RERGQ96A58 199 aaPredicted RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 EBNA1BP2Q99848 306 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 MESP1Q9BRJ9 268 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 TGIF2Q9GZN2 237 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 IARS2Q9NSE4 1012 aaKnown RBP21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 C14orf105Q9NVL8 296 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 PCYOX1Q9UHG3 505 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 C3orf18Q9UK00 162 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 UNC79Q9P2D8 2635 aa21.71■■□□□ 1.07
CDKN2A-212ENST00000578845 ICE1Q9Y2F5 2266 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 PCDH17O14917 1159 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 SEMA7AO75326 666 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 SYF2O95926 243 aaKnown RBP21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 HRH2P25021 359 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 FAM53BQ14153 422 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 PPP1R7Q15435 360 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 VWA2Q5GFL6 755 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 CISD2Q8N5K1 135 aaKnown RBP21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 SSC4DQ8WTU2 575 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 NAT9Q9BTE0 207 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 LRRC4CQ9HCJ2 640 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 TRMT6Q9UJA5 497 aaKnown RBP21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 CSAG2Q9Y5P2 127 aa21.7■■□□□ 1.06
CDKN2A-212ENST00000578845 MDC1Q14676 2089 aaKnown RBP21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 MAP2K7O14733 419 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 HAT1O14929 419 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 FOXS1O43638 330 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 CBX6O95503 412 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 SP140Q13342 867 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 UGT3A1Q6NUS8 523 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 KIAA0408Q6ZU52 694 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 PCGF5Q86SE9 256 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 GALNT7Q86SF2 657 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 LAPTM4BQ86VI4 370 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 PARP9Q8IXQ6 854 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 GABPB2Q8TAK5 448 aaPredicted RBP21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 DRC3Q9H069 523 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 MKKSQ9NPJ1 570 aaPredicted RBP21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 CCDC177Q9NQR7 707 aaPredicted RBP21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 MAP10Q9P2G4 905 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 TRPC4Q9UBN4 977 aa21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 NOVA2Q9UNW9 492 aaKnown RBP21.69■■□□□ 1.06
CDKN2A-212ENST00000578845 KCNE1BA0A087WTH5 132 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 P2RX6O15547 441 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 C8GP07360 202 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 COX6A1P12074 109 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 GABRB3P28472 473 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 TBPL1P62380 186 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 DHX9Q08211 1270 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 NR6A1Q15406 480 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 HIF1AQ16665 826 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 EIF2S3LQ2VIR3 472 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 SPANXN3Q5MJ09 141 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 THEMIS2Q5TEJ8 643 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 PRSS58Q8IYP2 241 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 MMABQ96EY8 250 aaPredicted RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 THOC3Q96J01 351 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 CCDC138Q96M89 665 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 PCBD2Q9H0N5 130 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 DDX47Q9H0S4 455 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 EPS8L2Q9H6S3 715 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 ZNF160Q9HCG1 818 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 TMEM184CQ9NVA4 438 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 TAS2R13Q9NYV9 303 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 ASIC3Q9UHC3 531 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 ADAMTS6Q9UKP5 1117 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 NTNG1Q9Y2I2 539 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 COPG1Q9Y678 874 aaKnown RBP21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 CNTRLQ7Z7A1 2325 aa21.68■■□□□ 1.06
CDKN2A-212ENST00000578845 IDSB3KWA1 339 aa21.67■■□□□ 1.06
CDKN2A-212ENST00000578845 TCP1P17987 556 aaKnown RBP21.67■■□□□ 1.06
CDKN2A-212ENST00000578845 FDXRP22570 491 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms