RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TMEM79Q9BSE2 394 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 NTMT1Q9BV86 223 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 BRINP2Q9C0B6 783 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GSTO2Q9H4Y5 243 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 IL21RQ9HBE5 538 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 FSCN3Q9NQT6 498 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 INTS7Q9NVH2 962 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 WWOXQ9NZC7 414 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 GPRC5BQ9NZH0 403 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 REV1Q9UBZ9 1251 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 RAPGEFL1Q9UHV5 662 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 HAO1Q9UJM8 370 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 PCTPQ9UKL6 214 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 TDRKHQ9Y2W6 561 aaKnown RBP7.74□□□□□ -1.17
COPS3-215ENST00000578317 ENTPD2Q9Y5L3 495 aa7.74□□□□□ -1.17
COPS3-215ENST00000578317 FANCMQ8IYD8 2048 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 THADAQ6YHU6 1953 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 TRBV23OR9-2A0A075B6M9 112 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 PRAMEF33A0A0G2JMD5 474 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LNP1A1A4G5 178 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LILRA5A6NI73 299 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 TRIM38O00635 465 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 CDX4O14627 284 aaPredicted RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 PPM1DO15297 605 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 UGDHO60701 494 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 FKBP9O95302 570 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 NEFHP12036 1026 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 TGM1P22735 817 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 PKLRP30613 574 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 CASP2P42575 452 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 GDF5P43026 501 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 SLC1A6P48664 564 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 HSPA7P48741 367 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 GYS2P54840 703 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 ABCE1P61221 599 aaKnown RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 OCRLQ01968 901 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 BST1Q10588 318 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LCP2Q13094 533 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 SQSTM1Q13501 440 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 RCN2Q14257 317 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 GPR18Q14330 331 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 TCEA2Q15560 299 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 ARL13AQ5H913 290 aaPredicted RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 CES4AQ5XG92 561 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 KLHL35Q6PF15 583 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 C6orf15Q6UXA7 325 aaPredicted RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 MBOAT1Q6ZNC8 495 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 THOC6Q86W42 341 aaKnown RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 WFDC8Q8IUA0 241 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 SLC35F3Q8IY50 421 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 SYTL1Q8IYJ3 562 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LSMEM2Q8N112 164 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 MINDY1Q8N5J2 469 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 CCNYL1Q8N7R7 359 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LINC01555Q8NAE3 123 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 PPP1R14CQ8TAE6 165 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 PPP4R1Q8TF05 950 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 LCN9Q8WX39 176 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 EXT2Q93063 718 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 ESAMQ96AP7 390 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 C7orf26Q96N11 449 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 ZNF317Q96PQ6 595 aaPredicted RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 HAUS8Q9BT25 410 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 HGH1Q9BTY7 390 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 EPB41L1Q9H4G0 881 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 EML4Q9HC35 981 aaKnown RBP7.73□□□□□ -1.17
COPS3-215ENST00000578317 ZBTB26Q9HCK0 441 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 DNAJC11Q9NVH1 559 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 OPTCQ9UBM4 332 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 ICKQ9UPZ9 632 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 SLC22A14Q9Y267 594 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 STK38LQ9Y2H1 464 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 CORINQ9Y5Q5 1042 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 KCNE2Q9Y6J6 123 aa7.73□□□□□ -1.17
COPS3-215ENST00000578317 PIKFYVEQ9Y2I7 2098 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 A0A1W2PPV9 198 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 EME2A4GXA9 379 aaPredicted RBP7.72□□□□□ -1.17
COPS3-215ENST00000578317 KRT87PA6NCN2 255 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 B4DGG1 531 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 MATN2O00339 956 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 ZW10O43264 779 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 SHOX2O60902 331 aaPredicted RBP7.72□□□□□ -1.17
COPS3-215ENST00000578317 NID1P14543 1247 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 GNAZP19086 355 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 EPORP19235 508 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 HRH2P25021 359 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 LSP1P33241 339 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 GRK6P43250 576 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 PKNOX1P55347 436 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 ABATP80404 500 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 PRDX1Q06830 199 aaKnown RBP7.72□□□□□ -1.17
COPS3-215ENST00000578317 CDC16Q13042 620 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 PRKAA1Q13131 559 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 GTF2H2Q13888 395 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 FASTKQ14296 549 aaKnown RBP7.72□□□□□ -1.17
COPS3-215ENST00000578317 KIR2DS3Q14952 304 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 TBCCQ15814 346 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 CCDC6Q16204 474 aa7.72□□□□□ -1.17
COPS3-215ENST00000578317 C18orf21Q32NC0 220 aaPredicted RBP7.72□□□□□ -1.17
COPS3-215ENST00000578317 GTF2H2CQ6P1K8 395 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms