RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 NPC1O15118 1278 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 ATG13O75143 517 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SEC14L2O76054 403 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SLCO2B1O94956 709 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 CAPN1P07384 714 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 ABCB1P08183 1280 aaPredicted RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 SERPINB1P30740 379 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 TIE1P35590 1138 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 GGT5P36269 586 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 GDF5P43026 501 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 MRPL19P49406 292 aaKnown RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 TAS2R38P59533 333 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 INTS11Q5TA45 600 aaKnown RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 AGBL4Q5VU57 503 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SPATA19Q7Z5L4 167 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 NLRP8Q86W28 1048 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 FAM20CQ8IXL6 584 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 TCAIMQ8N3R3 496 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 METTL6Q8TCB7 284 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 NRBF2Q96F24 287 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 EGLN2Q96KS0 407 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 NPAS2Q99743 824 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 SDR39U1Q9NRG7 319 aaPredicted RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 ARL15Q9NXU5 204 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 RABL2AQ9UBK7 228 aaPredicted RBP13.38□□□□□ -0.27
RNF43-202ENST00000577625 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
RNF43-202ENST00000577625 TCRBV3S1A0A5B6 114 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 STK16O75716 305 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 SEC24DO94855 1032 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 MATN4O95460 622 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CKMT2P17540 419 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CTHP32929 405 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 ARL1P40616 181 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 GPR1P46091 355 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 PIK3CGP48736 1102 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 HLCSP50747 726 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CDC20Q12834 499 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 DNASE1L3Q13609 305 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 MILR1Q7Z6M3 343 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 MIER2Q8N344 545 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 PARP8Q8N3A8 854 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 OR9I1Q8NGQ6 314 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 EPHX3Q9H6B9 360 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 DLGAP1O14490 977 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 ALX3O95076 343 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 KRT6AP02538 564 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 KRT6BP04259 564 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 HIST1H2AGP0C0S8 130 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 C7P10643 843 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 EPB42P16452 691 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 HIST1H2ADP20671 130 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CYP2A7P20853 494 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 HNMTP50135 292 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 RAD23AP54725 363 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 GRIK2Q13002 908 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 ZXDCQ2QGD7 858 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 ZNF658BQ4V348 819 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 CCDC58Q4VC31 144 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 REP15Q6BDI9 236 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 RNF165Q6ZSG1 346 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CLIP4Q8N3C7 705 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 LILRA3Q8N6C8 439 aaPredicted RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 OR2T11Q8NH01 316 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 PPWD1Q96BP3 646 aaKnown RBP13.37□□□□□ -0.27
RNF43-202ENST00000577625 HIST1H2AHQ96KK5 128 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 HIST1H2AJQ99878 128 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 CCM2Q9BSQ5 444 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 H2AFJQ9BTM1 129 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 KLQ9UEF7 1012 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
RNF43-202ENST00000577625 SLC5A10A0PJK1 596 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 ACOX3O15254 700 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 ASNA1O43681 348 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 NRP2O60462 931 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 LILRB5O75023 590 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
RNF43-202ENST00000577625 KCNH1O95259 989 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 ADH1BP00325 375 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 EBLN1P0CF75 366 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 PRKACBP22694 351 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 NR4A2P43354 598 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 AP1S2P56377 157 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 IFITM3Q01628 133 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 LRIT3Q3SXY7 679 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 BCL7AQ4VC05 210 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 KIAA1211LQ6NV74 962 aa13.36□□□□□ -0.27
RNF43-202ENST00000577625 SCIMPQ6UWF3 145 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms